RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 J3QRK9 145 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF701M0R085 212 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 KPNA6O60684 536 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 RASAL1O95294 804 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ZBTB11O95625 1053 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 GFAPP14136 432 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ATP4BP51164 291 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 CLCN5P51795 746 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 DIO3P55073 304 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ECT2LQ008S8 904 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 GALNT1Q10472 559 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 TGFBIQ15582 683 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 CYBRD1Q53TN4 286 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 IRAK1BP1Q5VVH5 260 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 LCN8Q6JVE9 175 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 NANOGP8Q6NSW7 305 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 TBPL2Q6SJ96 375 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ABRAXAS1Q6UWZ7 409 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 SPRED1Q7Z699 444 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 DHRSXQ8N5I4 330 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 MINDY1Q8N5J2 469 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 PTGR2Q8N8N7 351 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 OR13J1Q8NGT2 312 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 PTCD2Q8WV60 388 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 TWIST2Q8WVJ9 160 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 SEPT8Q92599 483 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 FBXL8Q96CD0 374 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 TUBGCP3Q96CW5 907 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 FEM1CQ96JP0 617 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 TRIM15Q9C019 465 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 MRM3Q9HC36 420 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 TBC1D23Q9NUY8 699 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 NUDT5Q9UKK9 219 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 CASP8AP2Q9UKL3 1982 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 MSI1O43347 362 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 CHRNA1P02708 482 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 HSD17B1P14061 328 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF182P17025 639 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 DCKP27707 260 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ACLYP53396 1101 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 C21orf59P57076 290 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 NKX3-2P78367 333 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 RPS6KA2Q15349 733 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 KIAA0408Q6ZU52 694 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 CILP2Q8IUL8 1156 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 ZBTB8BQ8NAP8 495 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 PLEKHA8Q96JA3 519 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 TEX37Q96LM6 180 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 SEPHS2Q99611 448 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 SLAMF8Q9P0V8 285 aa14.08□□□□□ -0.16
CLCNKA-202ENST00000375692 PDCD11Q14690 1871 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 BBIP1A8MTZ0 92 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 UBXN8O00124 270 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 PAGE1O75459 146 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 HGFP14210 728 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 MATN1P21941 496 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 CAPGP40121 348 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 PGFP49763 221 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 HERVK_113P63132 956 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ITKQ08881 620 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 TRAF2Q12933 501 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 IHHQ14623 411 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 PFKFB4Q16877 469 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF829Q3KNS6 432 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ZIK1Q3SY52 487 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 PHYKPLQ8IUZ5 450 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 SCAMP5Q8TAC9 235 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 L3HYPDHQ96EM0 354 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 TSPAN17Q96FV3 270 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 COX4I2Q96KJ9 171 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 TMEM74Q96NL1 305 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 TRMOQ9BU70 441 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ERVK-6Q9BXR3 956 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 SEZ6LQ9BYH1 1024 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 HMX1Q9NP08 348 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 POLR3BQ9NW08 1133 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 S1PR4O95977 384 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ELK4P28324 431 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 CASP2P42575 452 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 CD97P48960 835 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 GSK3BP49841 420 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 PTPRCAPQ14761 206 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 PYCR3Q53H96 274 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 TMTC4Q5T4D3 741 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ANKRD26P1Q6NSI1 321 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ZC3H7AQ8IWR0 971 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 BORCS5Q969J3 196 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 DOK1Q99704 481 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 ARMC7Q9H6L4 198 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 SMPD3Q9NY59 655 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 HACD3Q9P035 362 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 PCDHA9Q9Y5H5 950 aa14.07□□□□□ -0.16
CLCNKA-202ENST00000375692 AZIN1O14977 448 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 INHBBP09529 407 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 MAGEA8P43361 318 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 RPS9P46781 194 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 BMXP51813 675 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF33AQ06730 810 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 BNIP2Q12982 314 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms