RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 APOC2P02655 101 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GPSM2P81274 684 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 TWF1Q12792 350 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 IL23RQ5VWK5 629 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 RAB11FIP2Q7L804 512 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ABRAQ8N0Z2 381 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CYP4X1Q8N118 509 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ZDHHC7Q9NXF8 308 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 NPIPA7E9PJI5 369 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GATCO43716 136 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 IFNA21P01568 189 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 NPIPA8P0DM63 369 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 SLC7A2P52569 658 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 LSM12Q3MHD2 195 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 SPOCD1Q6ZMY3 1216 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CHST15Q7LFX5 561 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 GPN2Q9H9Y4 310 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 GGA3Q9NZ52 723 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 RPS6KB2Q9UBS0 482 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CYB5R1Q9UHQ9 305 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PRAF2O60831 178 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GLYATQ6IB77 296 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 TOMM5Q8N4H5 51 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 NPLQ9BXD5 320 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 STARD7Q9NQZ5 370 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 FBXO6Q9NRD1 293 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 C1orf109Q9NX04 203 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 MAGED2Q9UNF1 606 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 DDX39AO00148 427 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 PITPNM1O00562 1244 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 TDP2O95551 362 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 RHDQ02161 417 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 TEAD4Q15561 434 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 OVOS1Q6IE37 1185 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 HSDL2Q6YN16 418 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PROSER2Q86WR7 435 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 GTPBP8Q8N3Z3 284 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 ARL11Q969Q4 196 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 SGK3Q96BR1 496 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 RCN3Q96D15 328 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ACTR3BQ9P1U1 418 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ATAD2BQ9ULI0 1458 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 LOC100130705A0A1B0GUX0 176 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 FSHRP23945 695 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 UGT2B15P54855 530 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 SMARCB1Q12824 385 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CBFBQ13951 182 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 SNRNP35Q16560 246 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 BTBD16Q32M84 506 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 WDR26Q9H7D7 661 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ACTR8Q9H981 624 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 VPS51Q9UID3 782 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 SPACA6W5XKT8 324 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 TOP2AP11388 1531 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 ATP10DQ9P241 1426 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 IDH3AP50213 366 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ATAD3CQ5T2N8 411 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 LLGL2Q6P1M3 1020 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GPR63Q9BZJ6 419 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 USP18Q9UMW8 372 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 AGAP14A8MT82 685 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 M0QYV0 167 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CD9P21926 228 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 SLC6A2P23975 617 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PTPN6P29350 595 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 UGT2B10P36537 528 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 HPCAL1P37235 193 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 RENBPP51606 427 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GCNT1Q02742 428 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 SLC7A5P1Q8MH63 180 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GAB3Q8WWW8 586 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GATA6Q92908 595 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ATXN7L3BQ96GX2 97 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 FEM1CQ96JP0 617 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CIB1Q99828 191 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CYP27B1O15528 508 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PLATP00750 562 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PLEKP08567 350 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 C4orf46Q504U0 113 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 SLX4IPQ5VYV7 408 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 CDK5RAP1Q96SZ6 601 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 IL1RAPQ9NPH3 570 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ADGRF5Q8IZF2 1346 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 MMP8P22894 467 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 VARSP26640 1264 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 PSMA6P60900 246 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 SLC44A1Q8WWI5 657 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GTF2H4Q92759 462 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ZNF669Q96BR6 464 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 DNAJC1Q96KC8 554 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 RBAKQ9NYW8 714 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 GRM4Q14833 912 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 MOXD1Q6UVY6 613 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 TXNDC5Q8NBS9 432 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 DCAKDQ8WVC6 231 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 INPP4AQ96PE3 977 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 OPA3Q9H6K4 179 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PDP1Q9P0J1 537 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 AGAP5A6NIR3 686 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms