RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MAGEA4P43358 317 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 RECQLP46063 649 aaPredicted RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 CLCN3P51790 818 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SLC18A1P54219 525 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 RAD23BP54727 409 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 CCNA1P78396 465 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ACTN3Q08043 901 aaPredicted RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 TCF15Q12870 199 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 IFT88Q13099 833 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ZNF268Q14587 947 aaPredicted RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 LLGL1Q15334 1064 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 KYNUQ16719 465 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 HADHQ16836 314 aaKnown RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 LONRF1Q17RB8 773 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 P3H1Q32P28 736 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 DCAF4L1Q3SXM0 396 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 RNASEH2BQ5TBB1 312 aaKnown RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 VSTM1Q6UX27 236 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 DLK2Q6UY11 383 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SCARA5Q6ZMJ2 495 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 CCDC121Q6ZUS5 278 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 BBS12Q6ZW61 710 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ARMCX2Q7L311 632 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 GSTA5Q7RTV2 222 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 PIGWQ7Z7B1 504 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 CPLX4Q7Z7G2 160 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 PCGF5Q86SE9 256 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 THNSL1Q8IYQ7 743 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 TOR1AIP2Q8NFQ8 470 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 PPTC7Q8NI37 304 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 JOSD2Q8TAC2 188 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 AFG1LQ8WV93 481 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 TRAPPC12Q8WVT3 735 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 USP6NLQ92738 828 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ARHGEF2Q92974 986 aaKnown RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 SARAFQ96BY9 339 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 OPTNQ96CV9 577 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 LRIG1Q96JA1 1093 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 CABS1Q96KC9 395 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 NLRP4Q96MN2 994 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 CCDC77Q9BR77 488 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ELOVL4Q9GZR5 314 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 MIS12Q9H081 205 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SIK2Q9H0K1 926 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SDCBP2Q9H190 292 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 WDCPQ9H6R7 721 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 MINDY3Q9H8M7 445 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 GPR35Q9HC97 309 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 UBN1Q9NPG3 1134 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ETAA1Q9NY74 926 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SENP1Q9P0U3 644 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ZNF69Q9UC07 566 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 FETUBQ9UGM5 382 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ITGA11Q9UKX5 1188 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 DNPEPQ9ULA0 475 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 KIAA1257Q9ULG3 409 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SLC45A1Q9Y2W3 748 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 A0A087WZ62 844 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 GOLGA6L7A0A1B0GV03 622 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TMEM120BA0PK00 339 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 LRRD1A4D1F6 860 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 LRRC3CA6NJW4 275 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ZNF785A8K8V0 405 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 VSTM5A8MXK1 200 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 E7ESA3 106 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PI4K2BG5E9Z4 385 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 GOLGA8SH3BPF8 625 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ALOX15BO15296 676 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PRPF4O43172 522 aaKnown RBP eCLIP4.91□□□□□ -1.62
USP48-202ENST00000374730 TSPAN1O60635 241 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ERBB2P04626 1255 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 GJB1P08034 283 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 IQCF3P0C7M6 154 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 SETSIPP0DME0 302 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 KRT10P13645 584 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PECAM1P16284 738 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 TSHRP16473 764 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ARF4P18085 180 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 CD53P19397 219 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 LPOP22079 712 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 KDELR1P24390 212 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 RDXP35241 583 aaKnown RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 GPD2P43304 727 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 SLCO1A2P46721 670 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PIK3CGP48736 1102 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 VPS41P49754 854 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ARSEP51690 589 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 RBP5P82980 135 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TUBB3Q13509 450 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TMEM132DQ14C87 1099 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TRIP13Q15645 432 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 INO80DQ53TQ3 878 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 ANKRD20A8PQ5CZ79 823 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 C10orf62Q5T681 223 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 CYP4A22Q5TCH4 519 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TXNRD3NBQ6F5E7 133 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 JADE1Q6IE81 842 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 LCLAT1Q6UWP7 414 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms