RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 PLAAQ9Y263 795 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 FADS3Q9Y5Q0 445 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 ZFYVE26Q68DK2 2539 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 PSMD11O00231 422 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 CCL22O00626 93 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 AP1G1O43747 822 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 VAPBO95292 243 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 ARSDP51689 593 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 MGAT5Q09328 741 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 IFFO1Q0D2I5 559 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 KLHL38Q2WGJ6 581 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 TMEM52BQ4KMG9 183 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 PDPK2PQ6A1A2 396 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 TRMT10BQ6PF06 316 aaKnown RBP17.46■□□□□ 0.39
PFDN6-201ENST00000374606 AFTPHQ6ULP2 937 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 UNC5BQ8IZJ1 945 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 CXorf40AQ8TE69 158 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 FAM131CQ96AQ9 280 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 EID2BQ96D98 161 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 CYTH2Q99418 400 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 CCDC77Q9BR77 488 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 BPIFA1Q9NP55 256 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 FKBPLQ9UIM3 349 aa17.46■□□□□ 0.39
PFDN6-201ENST00000374606 EXOC1LA0A1B0GW35 172 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 TSPAN6O43657 245 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 PLRG1O43660 514 aaKnown RBP17.45■□□□□ 0.38
PFDN6-201ENST00000374606 RHOBTB1O94844 696 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 APBB3O95704 486 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 IVLP07476 585 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 PSMA3P25788 255 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 ARNTP27540 789 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 SPAM1P38567 509 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 LIG3P49916 1009 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 TAS2R38P59533 333 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 FOXC1Q12948 553 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 THOC5Q13769 683 aaKnown RBP17.45■□□□□ 0.38
PFDN6-201ENST00000374606 STAT4Q14765 748 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 EFTUD2Q15029 972 aaKnown RBP eCLIP17.45■□□□□ 0.382e-7■■■■■ 32.6
PFDN6-201ENST00000374606 ZDHHC20Q5W0Z9 365 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 LIPIQ6XZB0 460 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 CYS1Q717R9 158 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 HSD11B1LQ7Z5J1 315 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 KDF1Q8NAX2 398 aaPredicted RBP17.45■□□□□ 0.38
PFDN6-201ENST00000374606 OR6P1Q8NGX9 317 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 OR14C36Q8NHC7 312 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 GABPB2Q8TAK5 448 aaPredicted RBP17.45■□□□□ 0.38
PFDN6-201ENST00000374606 HDAC10Q969S8 669 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 TBATAQ96M53 351 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 FAM167BQ9BTA0 163 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 DUSP15Q9H1R2 295 aaPredicted RBP17.45■□□□□ 0.38
PFDN6-201ENST00000374606 RAD18Q9NS91 495 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 MOCS1Q9NZB8 636 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 IL1RAPL1Q9NZN1 696 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 ZFATQ9P243 1243 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 RABGEF1Q9UJ41 708 aa17.45■□□□□ 0.38
PFDN6-201ENST00000374606 FNDC3AQ9Y2H6 1198 aaKnown RBP17.45■□□□□ 0.38
PFDN6-201ENST00000374606 CCDC162PA2VCL2 907 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 FAM159BA6NKW6 160 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 C4orf47A7E2U8 309 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 H7C0S8 307 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 PCDH8O95206 1070 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 SHBGP04278 402 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 ERVK-10P10266 1014 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 C6P13671 934 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 BPIP17213 487 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 MC4RP32245 332 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 ARCN1P48444 511 aaKnown RBP17.44■□□□□ 0.38
PFDN6-201ENST00000374606 SPINT3P49223 89 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 TPMTP51580 245 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 ADPRHP54922 357 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 CREB5Q02930 508 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 PTSQ03393 145 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 NAB1Q13506 487 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 ACOX1Q15067 660 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 KBTBD12Q3ZCT8 623 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 ALS2CLQ60I27 953 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 FAM124AQ86V42 546 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 CTAGE3PQ8IX95 158 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 CBARPQ8N350 705 aaPredicted RBP17.44■□□□□ 0.38
PFDN6-201ENST00000374606 OTUD6BQ8N6M0 293 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 CDKN2AIPNLQ96HQ2 116 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 RUFY1Q96T51 708 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 USP36Q9P275 1121 aaKnown RBP17.44■□□□□ 0.38
PFDN6-201ENST00000374606 PLXNA2O75051 1894 aa17.44■□□□□ 0.38
PFDN6-201ENST00000374606 GLYATL1P3A0A0U1RQE8 302 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 RGSL1A5PLK6 1076 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 TMEM8BA6NDV4 472 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 GIPC1O14908 333 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 MMP20O60882 483 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 GOT2P00505 430 aaKnown RBP17.43■□□□□ 0.38
PFDN6-201ENST00000374606 EIF3BP55884 814 aaKnown RBP17.43■□□□□ 0.38
PFDN6-201ENST00000374606 DCDC1P59894 354 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 HSP90AA5PQ58FG0 334 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 ZNF470Q6ECI4 717 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 LRIG3Q6UXM1 1119 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 FAM151BQ6UXP7 276 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 RAVER1Q8IY67 606 aaKnown RBP17.43■□□□□ 0.38
PFDN6-201ENST00000374606 PPM1NQ8N819 430 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 OR4L1Q8NH43 312 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms