RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SOBPA7XYQ1 873 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 MEN1O00255 615 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 NUPL2O15504 423 aaKnown RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 GNAO1P09471 354 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 NCAM1P13591 858 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 MYL12AP19105 171 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 POLR2CP19387 275 aaPredicted RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 CDC42P60953 191 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 NCS1P62166 190 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 CCNA1P78396 465 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 CDH17Q12864 832 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SEZ6Q53EL9 994 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 STRIP1Q5VSL9 837 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 FAM160B1Q5W0V3 765 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 GCNT7Q6ZNI0 430 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SVOPLQ8N434 492 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 CYP2W1Q8TAV3 490 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 TXNDC15Q96J42 360 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ITPAQ9BY32 194 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ATP13A3Q9H7F0 1226 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 TIGARQ9NQ88 270 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 DDX4Q9NQI0 724 aaKnown RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 OLAHQ9NV23 265 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 MYH13Q9UKX3 1938 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ARHGEF33A8MVX0 844 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ADAMTS3O15072 1205 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ZBTB14O43829 449 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 MAPTP10636 758 aaKnown RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 FGF3P11487 239 aaPredicted RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 SLC2A4P14672 509 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 KCNA5P22460 613 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ETV4P43268 484 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ETV1P50549 477 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ARSFP54793 590 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SLC9A5Q14940 896 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SIX1Q15475 284 aaPredicted RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 DDI2Q5TDH0 399 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ZYG11AQ6WRX3 759 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 FAM92BQ6ZTR7 304 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 CARM1Q86X55 608 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 FEM1CQ96JP0 617 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 MND1Q9BWT6 205 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SNTG1Q9NSN8 517 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 BTRCQ9Y297 605 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 UBXN8O00124 270 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 RASAL1O95294 804 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 DHRS4L1P0CG22 281 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 PTPN2P17706 415 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 PSMB4P28070 264 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 NUP62P37198 522 aaPredicted RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 RHBDL3P58872 404 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 RAB10P61026 200 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 RPL6Q02878 288 aaKnown RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 PSMD5Q16401 504 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 FGD2Q7Z6J4 655 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 LPCAT1Q8NF37 534 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 OR8K3Q8NH51 312 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 ASIC4Q96FT7 647 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 CNPPD1Q9BV87 410 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 GSDMCQ9BYG8 508 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 NTN4Q9HB63 628 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 CHRAC1Q9NRG0 131 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 CCM2LQ9NUG4 571 aaPredicted RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 NKIRAS2Q9NYR9 191 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 H2AFY2Q9P0M6 372 aaPredicted RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 NUFIP1Q9UHK0 495 aaKnown RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 ENOPH1Q9UHY7 261 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 TMCC3Q9ULS5 477 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 MAB21L2Q9Y586 359 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 A0A087WZ62 844 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 A0A087X1B8 175 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 NDUFS3O75489 264 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 RFPL1O75677 317 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 ANXA9O76027 345 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 RAP2AP10114 183 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 CPOXP36551 454 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 ZNF81P51508 661 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 P2RX3P56373 397 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 RFTN1Q14699 578 aaPredicted RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 FAM214AQ32MH5 1076 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 ATAD3CQ5T2N8 411 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 TRPV1Q8NER1 839 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 NACC2Q96BF6 587 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 ZC3H10Q96K80 434 aaKnown RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 PPIL3Q9H2H8 161 aaKnown RBP10.21□□□□□ -0.77
CD28-202ENST00000374481 ALG9Q9H6U8 611 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 AMBNQ9NP70 447 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 FAM8A1Q9UBU6 413 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 MORF4L1Q9UBU8 362 aa10.21□□□□□ -0.77
CD28-202ENST00000374481 POLR1CO15160 346 aaPredicted RBP10.21□□□□□ -0.78
CD28-202ENST00000374481 DYNC1LI2O43237 492 aaPredicted RBP10.21□□□□□ -0.78
CD28-202ENST00000374481 SULT1C4O75897 302 aa10.21□□□□□ -0.78
CD28-202ENST00000374481 GH2P01242 217 aa10.21□□□□□ -0.78
CD28-202ENST00000374481 JCHAINP01591 159 aa10.21□□□□□ -0.78
CD28-202ENST00000374481 CYP11A1P05108 521 aa10.21□□□□□ -0.78
CD28-202ENST00000374481 DSG3P32926 999 aa10.21□□□□□ -0.78
CD28-202ENST00000374481 LEPRP48357 1165 aaKnown RBP10.21□□□□□ -0.78
CD28-202ENST00000374481 DCDC1P59894 354 aa10.21□□□□□ -0.78
CD28-202ENST00000374481 MYL6P60660 151 aa10.21□□□□□ -0.78
CD28-202ENST00000374481 RPS7P62081 194 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms