RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CAPNS2Q96L46 248 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 VPS35Q96QK1 796 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 SEPHS2Q99611 448 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 MUC13Q9H3R2 512 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 TOR3AQ9H497 397 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 C12orf10Q9HB07 376 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 NTN4Q9HB63 628 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 TNFRSF12AQ9NP84 129 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 FAM118AQ9NWS6 357 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 PAK1IP1Q9NWT1 392 aaPredicted RBP12.88□□□□□ -0.35
PRPF4-201ENST00000374198 DTLQ9NZJ0 730 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 FBXO5Q9UKT4 447 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 A0A0J9YYE9 177 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 B8ZZF3 427 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 MDM4O15151 490 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 PIGRP01833 764 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 TCF3P15923 654 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 NCK1P16333 377 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 PSMB4P28070 264 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 PKLRP30613 574 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 ACTR2P61160 394 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 ACOX1Q15067 660 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF699Q32M78 642 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 SPATS1Q496A3 300 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 COLEC12Q5KU26 742 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 SPATC1Q76KD6 591 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 OTOP3Q7RTS5 596 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 SLC22A15Q8IZD6 547 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 DEPDC4Q8N2C3 294 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 RORBQ92753 470 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 NXNL1Q96CM4 212 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 UBA2Q9UBT2 640 aaPredicted RBP12.88□□□□□ -0.35
PRPF4-201ENST00000374198 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 OSGIN1Q9UJX0 560 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
PRPF4-201ENST00000374198 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 ZW10O43264 779 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 TBC1D4O60343 1298 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 ASNSP08243 561 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 HTR3AP46098 478 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 CD47Q08722 323 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 OLIG2Q13516 323 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 SUZ12Q15022 739 aaKnown RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 VPS26BQ4G0F5 336 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 OR6B2Q6IFH4 312 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 KCNMB4Q86W47 210 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 IFNEQ86WN2 208 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 CADM2Q8N3J6 435 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 OR52K1Q8NGK4 314 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 LGMNQ99538 433 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 B3GNT4Q9C0J1 378 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 POMKQ9H5K3 350 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 ITM2CQ9NQX7 267 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 PLSCR3Q9NRY6 295 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 IARS2Q9NSE4 1012 aaKnown RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 PPP2R3BQ9Y5P8 575 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 M0QYV0 167 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 UPK1AO00322 258 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 SLC1A7O00341 560 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 POLR1CO15160 346 aaPredicted RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 SNX2O60749 519 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 GSK3BP49841 420 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 OR2B6P58173 313 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 DNAJB13P59910 316 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 FCHO2Q0JRZ9 810 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 HSPA14Q0VDF9 509 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 MOB2Q70IA6 237 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 BEND5Q7L4P6 421 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 STK32CQ86UX6 486 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 PTRH1Q86Y79 214 aaKnown RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 BPIFB1Q8TDL5 484 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 LRRC58Q96CX6 371 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 MAP6Q96JE9 813 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 ZFYVE19Q96K21 471 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 RNF145Q96MT1 663 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 GPR78Q96P69 363 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 TRIM8Q9BZR9 551 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 RETREG1Q9H6L5 497 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 PLEKHA5Q9HAU0 1116 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 PCDHA9Q9Y5H5 950 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 MAGED1Q9Y5V3 778 aaPredicted RBP12.87□□□□□ -0.35
PRPF4-201ENST00000374198 SIPA1L1O43166 1804 aa12.87□□□□□ -0.35
PRPF4-201ENST00000374198 K7ERI5 159 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ANGPT2O15123 496 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 STBD1O95210 358 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 MT-CO1P00395 513 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 CAPN3P20807 821 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 DNAJB1P25685 340 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 GTF2E2P29084 291 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms