RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 LYPLA1O75608 230 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-206ENST00000372077 TROVE2P10155 538 aaKnown RBP eCLIP18.4■□□□□ 0.543e-17■■■□□ 18.6
VEGFA-206ENST00000372077 ALDH18A1P54886 795 aaKnown RBP18.4■□□□□ 0.54
VEGFA-206ENST00000372077 PEX6Q13608 980 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 ISLR2Q6UXK2 745 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 KCNMB4Q86W47 210 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 NDUFAF2Q8N183 169 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 WDR60Q8WVS4 1066 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 CDKL2Q92772 493 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 PPP1R36Q96LQ0 422 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 CADM1Q9BY67 442 aaKnown RBP18.4■□□□□ 0.54
VEGFA-206ENST00000372077 C20orf27Q9GZN8 174 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 NMUR2Q9GZQ4 415 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 NLE1Q9NVX2 485 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-206ENST00000372077 DUSP12Q9UNI6 340 aa18.4■□□□□ 0.54
VEGFA-206ENST00000372077 C2orf81A6NN90 581 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 EPHX1P07099 455 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 LPOP22079 712 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-206ENST00000372077 TMPRSS15P98073 1019 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 PDE1BQ01064 536 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 GRSF1Q12849 480 aaKnown RBP eCLIP18.39■□□□□ 0.537e-8■□□□□ 8.8
VEGFA-206ENST00000372077 TEDDM1Q5T9Z0 273 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 PAF1Q8N7H5 531 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 SARDHQ9UL12 918 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 VAPBO95292 243 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 TIE1P35590 1138 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 SLC26A11Q86WA9 606 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 CHPFQ8IZ52 775 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 OR13C4Q8NGS5 318 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 MZB1Q8WU39 189 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 DNAJC1Q96KC8 554 aaKnown RBP18.39■□□□□ 0.53
VEGFA-206ENST00000372077 C19orf43Q9BQ61 176 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 ZNF180Q9UJW8 692 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 ACTL7BQ9Y614 415 aa18.39■□□□□ 0.53
VEGFA-206ENST00000372077 COPEO14579 308 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 DCTN3O75935 186 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 HAUS5O94927 633 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 TIMP2P16035 220 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 ARSDP51689 593 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 SEC13P55735 322 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 ZP2Q05996 745 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 CAMK2GQ13555 558 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-206ENST00000372077 PTPRCAPQ14761 206 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 UGP2Q16851 508 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 HSP90AA5PQ58FG0 334 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 EID2BQ96D98 161 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 GYG2O15488 501 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 SLC7A4O43246 635 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 BUD23O43709 281 aaKnown RBP18.38■□□□□ 0.53
VEGFA-206ENST00000372077 RIPK1Q13546 671 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 CHI3L2Q15782 390 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 CCDC6Q16204 474 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 TPRG1Q6ZUI0 275 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 USP45Q70EL2 814 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 LYSMD3Q7Z3D4 306 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 RASSF3Q86WH2 238 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 CNTN4Q8IWV2 1026 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 HIPK4Q8NE63 616 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 PIP4K2CQ8TBX8 421 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 HDAC10Q969S8 669 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 GABRG3Q99928 467 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 TRIM55Q9BYV6 548 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 LRMDAQ9H2I8 198 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 IL17CQ9P0M4 197 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 ZFATQ9P243 1243 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 PACSIN3Q9UKS6 424 aa18.38■□□□□ 0.53
VEGFA-206ENST00000372077 RPP40O75818 363 aaKnown RBP18.37■□□□□ 0.53
VEGFA-206ENST00000372077 NTSR1P30989 418 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 HMGCLP35914 325 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 OR4K2Q8NGD2 314 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 MCUR1Q96AQ8 359 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 GRAMD1AQ96CP6 724 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 CDKN2AIPNLQ96HQ2 116 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 TBATAQ96M53 351 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 RILPQ96NA2 401 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 RAB3IPQ96QF0 476 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-206ENST00000372077 EBF4Q9BQW3 602 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 NPIPB15A6NHN6 443 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-206ENST00000372077 C16orf96A6NNT2 1141 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 WASP42768 502 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 SERPINB4P48594 390 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 PTDSS1P48651 473 aaKnown RBP18.37■□□□□ 0.53
VEGFA-206ENST00000372077 MRPS21P82921 87 aaKnown RBP18.37■□□□□ 0.53
VEGFA-206ENST00000372077 RCN1Q15293 331 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 LRRC36Q1X8D7 754 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 CRTC1Q6UUV9 634 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 POU5F2Q8N7G0 328 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 FAM3CQ92520 227 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 AGAP2Q99490 1192 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 GPR63Q9BZJ6 419 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 YIPF3Q9GZM5 350 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 MFSD1Q9H3U5 465 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 KCNK13Q9HB14 408 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 ZFYVE1Q9HBF4 777 aa18.37■□□□□ 0.53
VEGFA-206ENST00000372077 IARS2Q9NSE4 1012 aaKnown RBP18.37■□□□□ 0.53
VEGFA-206ENST00000372077 A0A0U1RQS6 177 aa18.36■□□□□ 0.53
VEGFA-206ENST00000372077 UPK3BL1B0FP48 263 aa18.36■□□□□ 0.53
VEGFA-206ENST00000372077 UPK3BL2E5RIL1 263 aa18.36■□□□□ 0.53
VEGFA-206ENST00000372077 MAP3K13O43283 966 aa18.36■□□□□ 0.53
VEGFA-206ENST00000372077 SORBS2O94875 1100 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms