RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 VTI1BQ9UEU0 232 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 SCOCQ9UIL1 159 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 AURKCQ9UQB9 309 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ASB1Q9Y576 335 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 TCAF2A6NFQ2 919 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 KIF3CO14782 793 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF189O75820 626 aaPredicted RBP11.71□□□□□ -0.54
PDE6C-201ENST00000371447 MT-ND1P03886 318 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 HMGA1P17096 107 aaKnown RBP11.71□□□□□ -0.54
PDE6C-201ENST00000371447 GGT5P36269 586 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 STC1P52823 247 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 DIO3P55073 304 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 MTTPP55157 894 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 PSME3P61289 254 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF678Q5SXM1 525 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 LYSMD3Q7Z3D4 306 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 AMIGO2Q86SJ2 522 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 C19orf60Q96EN9 201 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 LINGO1Q96FE5 620 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 FEM1CQ96JP0 617 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 UBXN10Q96LJ8 280 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 SERPINI1Q99574 410 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 CIDEBQ9UHD4 219 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 DNAJC15Q9Y5T4 150 aa11.71□□□□□ -0.54
PDE6C-201ENST00000371447 MRASO14807 208 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 SNX2O60749 519 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 CDK14O94921 469 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 PRLP01236 227 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 ACADSP16219 412 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 GABRR2P28476 465 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 MAPKAPK2P49137 400 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 VEGFBP49765 207 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 CDH4P55283 916 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 ARF5P84085 180 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 METTL21CQ5VZV1 264 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 MFN1Q8IWA4 741 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 TEX26Q8N6G2 289 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 PHC3Q8NDX5 983 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF461Q8TAF7 563 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 PPP1R2P1Q96PQ5 205 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 TUBGCP5Q96RT8 1024 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 BOCQ9BWV1 1114 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 MAGEH1Q9H213 219 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 EIF2B4Q9UI10 523 aaKnown RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 SQORQ9Y6N5 450 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 MYO16Q9Y6X6 1858 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 ANKRD66B4E2M5 251 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 GIPC1O14908 333 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 ECI2O75521 394 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 SLC7A2P52569 658 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 YBX1P67809 324 aaKnown RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 FAM110BQ8TC76 370 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 CNBD2Q96M20 576 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 PSKH2Q96QS6 385 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF334Q9HCZ1 680 aaPredicted RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 TRMT6Q9UJA5 497 aaKnown RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 RPL26L1Q9UNX3 145 aaKnown RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 DOCK6Q96HP0 2047 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 A0A1W2PRU2 124 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 KRT87PA6NCN2 255 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 CCNT2O60583 730 aaKnown RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 RNASEH1O60930 286 aaKnown RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 FKBP6O75344 327 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 CLDN11O75508 207 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 PSMC3P17980 439 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 IMPDH1P20839 514 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 LPOP22079 712 aaPredicted RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 ME2P23368 584 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 GDF5P43026 501 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 STK19P49842 368 aaPredicted RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 APLP1P51693 650 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 RAD51Q06609 339 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 PGM2L1Q6PCE3 622 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 DNAJB14Q8TBM8 379 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 TWIST2Q8WVJ9 160 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 MRPL9Q9BYD2 267 aaKnown RBP11.7□□□□□ -0.54
PDE6C-201ENST00000371447 PIDD1Q9HB75 910 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 APPL1Q9UKG1 709 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 SNX13Q9Y5W8 968 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 SLC30A1Q9Y6M5 507 aa11.7□□□□□ -0.54
PDE6C-201ENST00000371447 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 VWA8A3KMH1 1905 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 C1orf232A0A0U1RR37 186 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 A0A1B0GVM2 712 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 FFAR3O14843 346 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 GPR42O15529 346 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 IGLV3-27P01718 113 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 POLE2P56282 527 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 TIAL1Q01085 375 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 IKBKEQ14164 716 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 FRG1Q14331 258 aaKnown RBP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 GK3PQ14409 553 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 PTRHD1Q6GMV3 140 aaKnown RBP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 IYDQ6PHW0 289 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 FRA10AC1Q70Z53 315 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 DET1Q7L5Y6 550 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 TDRD1Q9BXT4 1180 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms