RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 EOMESO95936 686 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 LIMK2P53671 638 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 HADHBP55084 474 aaKnown RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 ELP6Q0PNE2 266 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 RINLQ6ZS11 566 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 AMIGO2Q86SJ2 522 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 CIR1Q86X95 450 aaPredicted RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 BEND7Q8N7W2 519 aaPredicted RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 TSPAN14Q8NG11 270 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 POP5Q969H6 163 aaKnown RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 TBATAQ96M53 351 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 SLC38A2Q96QD8 506 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 TNKS2Q9H2K2 1166 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 POLR1BQ9H9Y6 1135 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 DNAJC11Q9NVH1 559 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 RBPJLQ9UBG7 517 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 RPL26L1Q9UNX3 145 aaKnown RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 SAMHD1Q9Y3Z3 626 aaKnown RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 PCDHGA4Q9Y5G9 962 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 LTN1O94822 1766 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 A0A1W2PQ67 120 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 SERPINB7O75635 380 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 USP46P62068 366 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 DEPDC4Q8N2C3 294 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 TRIT1Q9H3H1 467 aaKnown RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 DNAJC28Q9NX36 388 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 FBXW11Q9UKB1 542 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 PTPRJQ12913 1337 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 NRP2O60462 931 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 PSMD8P48556 350 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 UGT2B15P54855 530 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 TAF13Q15543 124 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 AAGABQ6PD74 315 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 ZYG11AQ6WRX3 759 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 CERS6Q6ZMG9 384 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 OTOP2Q7RTS6 562 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 LDB1Q86U70 411 aaPredicted RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 HEATR4Q86WZ0 1026 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 OR7D4Q8NG98 312 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 PLD4Q96BZ4 506 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 HOPXQ9BPY8 73 aaPredicted RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 MAGEL2Q9UJ55 1249 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 GSTK1Q9Y2Q3 226 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 ATRNL1Q5VV63 1379 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 CCNA2P20248 432 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 C11orf88Q6PI97 169 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 MFSD3Q96ES6 412 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 ZNF607Q96SK3 696 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 FNDC11Q9BVV2 318 aa19.6■□□□□ 0.73
LMO4-202ENST00000370544 MRPS26Q9BYN8 205 aaKnown RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 PHPT1Q9NRX4 125 aaPredicted RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 SIGLEC1Q9BZZ2 1709 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 LOC100506127A0A0U1RQW1 187 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 LGR5O75473 907 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 ZNF37AP17032 561 aaPredicted RBP19.59■□□□□ 0.73
LMO4-202ENST00000370544 CLK3P49761 638 aaKnown RBP19.59■□□□□ 0.73
LMO4-202ENST00000370544 PHYKPLQ8IUZ5 450 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 MYDGFQ969H8 173 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 TRMT13Q9NUP7 481 aaKnown RBP19.59■□□□□ 0.73
LMO4-202ENST00000370544 H3BM21 787 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 RABGGTBP53611 331 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 C21orf59P57076 290 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 CAPNS2Q96L46 248 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 C7orf26Q96N11 449 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 RPTORQ8N122 1335 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 INSIG1O15503 277 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 SUV39H1O43463 412 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 STX11O75558 287 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 CCNYL3P0C7X3 344 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 TTKP33981 857 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 PBX3P40426 434 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 PEX6Q13608 980 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 CPTPQ5TA50 214 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 OR10H3O60404 316 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 SLC6A2P23975 617 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 PTGIRP43119 386 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 KLHL23Q8NBE8 558 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 ZNF540Q8NDQ6 660 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 CLHC1Q8NHS4 586 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 NUDT4Q9NZJ9 180 aa19.59■□□□□ 0.73
LMO4-202ENST00000370544 PRAMEF1O95521 474 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 TRBC1P01850 177 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 UNGP13051 313 aaPredicted RBP19.58■□□□□ 0.73
LMO4-202ENST00000370544 KLF10Q13118 480 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 TMPRSS11BQ86T26 416 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 ENKURQ8TC29 256 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 KNDC1Q76NI1 1749 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 SLC38A8A6NNN8 435 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 AP3D1O14617 1153 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 SLC28A2O43868 658 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 GNPDA1P46926 289 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 DEF8Q6ZN54 512 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 TWIST2Q8WVJ9 160 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 ACSS2Q9NR19 701 aa19.58■□□□□ 0.73
LMO4-202ENST00000370544 BUD31P41223 144 aaPredicted RBP19.58■□□□□ 0.72
LMO4-202ENST00000370544 PRKCZQ05513 592 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 PSRC1Q6PGN9 363 aaPredicted RBP19.58■□□□□ 0.72
LMO4-202ENST00000370544 CCDC28BQ9BUN5 200 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 LRTM1Q9HBL6 345 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms