RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TGFB3P10600 412 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 LEPRP48357 1165 aaKnown RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 INO80DQ53TQ3 878 aaPredicted RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 INTS11Q5TA45 600 aaKnown RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 SPOCD1Q6ZMY3 1216 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 CREB3L2Q70SY1 520 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 EEPD1Q7L9B9 569 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 ERMP1Q7Z2K6 904 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 FGD2Q7Z6J4 655 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 TTLQ8NG68 377 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 FEZF2Q8TBJ5 459 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 SLC20A1Q8WUM9 679 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 TSNAXQ99598 290 aaKnown RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 HOPXQ9BPY8 73 aaPredicted RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 CCDC32Q9BV29 185 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 CCDC106Q9BWC9 280 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 TXLNGYQ9BZA5 131 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 GPN2Q9H9Y4 310 aaPredicted RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 PRDM5Q9NQX1 630 aaPredicted RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 PAK1IP1Q9NWT1 392 aaPredicted RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 SLC27A5Q9Y2P5 690 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 RSL1D1O76021 490 aaKnown RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 THEGLP0DJG4 465 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 C7P10643 843 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 JUPP14923 745 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 MYF6P23409 242 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 GNA15P30679 374 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 CRHR1P34998 444 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 GPC1P35052 558 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 DCDC1P59894 354 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 ADAM15Q13444 863 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 FAM20AQ96MK3 541 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 RBM4BQ9BQ04 359 aaKnown RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 FEM1AQ9BSK4 669 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 RBM4Q9BWF3 364 aaKnown RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 KLHL8Q9P2G9 620 aaPredicted RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 ADGRE2Q9UHX3 823 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 CDH7Q9ULB5 785 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 OAZ3Q9UMX2 235 aa10.4□□□□□ -0.74
PRDM1-201ENST00000369089 DRG1Q9Y295 367 aaKnown RBP10.4□□□□□ -0.74
PRDM1-201ENST00000369089 hCG_2039718K7EN88 272 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 PRAMEF1O95521 474 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 SDC2P34741 201 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 UGT2B15P54855 530 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 CDKL1Q00532 357 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 LRIT3Q3SXY7 679 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 PIWIL3Q7Z3Z3 882 aaKnown RBP10.4□□□□□ -0.75
PRDM1-201ENST00000369089 SLC44A2Q8IWA5 706 aaPredicted RBP10.4□□□□□ -0.75
PRDM1-201ENST00000369089 CPNE9Q8IYJ1 553 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 CDYL2Q8N8U2 506 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 PSD4Q8NDX1 1056 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 CCDC115Q96NT0 180 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 RSAD1Q9HA92 442 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 RC3H2Q9HBD1 1191 aaKnown RBP10.4□□□□□ -0.75
PRDM1-201ENST00000369089 AASSQ9UDR5 926 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 DNMT3LQ9UJW3 386 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 NCKAP1Q9Y2A7 1128 aa10.4□□□□□ -0.75
PRDM1-201ENST00000369089 CAPN14A8MX76 684 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 KRBOX1C9JBD0 128 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 KLRC4O43908 158 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 PIK3CBP42338 1070 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 MLLT6P55198 1093 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 TROAPQ12815 778 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CYP1B1Q16678 543 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ATP6AP1LQ52LC2 224 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 GPAT3Q53EU6 434 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 GPRC6AQ5T6X5 926 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 NDUFAF5Q5TEU4 345 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 TCEAL6Q6IPX3 200 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 C3orf33Q6P1S2 294 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 TMEM270Q6UE05 265 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CHST15Q7LFX5 561 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SSX6Q7RTT6 188 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SYVN1Q86TM6 617 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 MIER2Q8N344 545 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 LPCAT1Q8NF37 534 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ST8SIA4Q92187 359 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SECISBP2Q96T21 854 aaKnown RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 VAT1Q99536 393 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 APBA2Q99767 749 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 NARFLQ9H6Q4 476 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 LRRC40Q9H9A6 602 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 XPR1Q9UBH6 696 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 MGAT4BQ9UQ53 548 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 LOC105371267A0A1B0GV96 52 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 OR6C65A6NJZ3 312 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 AQP12BA6NM10 295 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 RFPL3O75679 317 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CCNDBP1O95273 360 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CHRNA1P02708 482 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 STOMP27105 288 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ACOT2P49753 483 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 GRSF1Q12849 480 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SNTA1Q13424 505 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 POU4F3Q15319 338 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SETMARQ53H47 684 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 AQP12AQ8IXF9 295 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 OR13J1Q8NGT2 312 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms