RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 VPS9D1Q9Y2B5 631 aa24.79■■□□□ 1.56
CLK2-203ENST00000368361 SDHDO14521 159 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 RFPL2O75678 378 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 PKMP14618 531 aaKnown RBP24.78■■□□□ 1.56
CLK2-203ENST00000368361 BTKQ06187 659 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 BCL2L1Q07817 233 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 UNC50Q53HI1 259 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 FAM219BQ5XKK7 198 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 PTGR2Q8N8N7 351 aaPredicted RBP24.78■■□□□ 1.56
CLK2-203ENST00000368361 SHKBP1Q8TBC3 707 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 MARK4Q96L34 752 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 DERL2Q9GZP9 239 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 IKZF3Q9UKT9 509 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 OAS3Q9Y6K5 1087 aaKnown RBP24.78■■□□□ 1.56
CLK2-203ENST00000368361 A0A088AWK7 358 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 NIPSNAP2O75323 286 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 PIK3R1P27986 724 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 PPARGP37231 505 aaPredicted RBP24.78■■□□□ 1.56
CLK2-203ENST00000368361 CLCN4P51793 760 aa24.78■■□□□ 1.56
CLK2-203ENST00000368361 SWT1Q5T5J6 900 aaKnown RBP24.78■■□□□ 1.56
CLK2-203ENST00000368361 MRPL43Q8N983 215 aaKnown RBP24.78■■□□□ 1.56
CLK2-203ENST00000368361 MTCL1Q9Y4B5 1905 aaKnown RBP24.78■■□□□ 1.56
CLK2-203ENST00000368361 MYOFQ9NZM1 2061 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 PFDN6O15212 129 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 SIX3O95343 332 aaPredicted RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 CTNNB1P35222 781 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 CTSOP43234 321 aaPredicted RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 C1QTNF8P60827 252 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 PPIGQ13427 754 aaKnown RBP eCLIP24.77■■□□□ 1.563e-9■■■□□ 15.7
CLK2-203ENST00000368361 CUL3Q13618 768 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 PFKFB4Q16877 469 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 DGKKQ5KSL6 1271 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 TAS2R42Q7RTR8 314 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 CPSF7Q8N684 471 aaKnown RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 LBHD1Q9BQE6 289 aaPredicted RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 HTRA2O43464 458 aaPredicted RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 LMNAP02545 664 aaKnown RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 CYBBP04839 570 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 HLA-FP30511 346 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 STK19P49842 368 aaPredicted RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 RAD51Q06609 339 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 SIDT2Q8NBJ9 832 aaKnown RBP24.77■■□□□ 1.56
CLK2-203ENST00000368361 KIAA1191Q96A73 305 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 RAD9AQ99638 391 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 TRMOQ9BU70 441 aa24.77■■□□□ 1.56
CLK2-203ENST00000368361 CCDC189A1A4V9 331 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 LRRC14BA6NHZ5 514 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 KRT36O76013 467 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 PYGLP06737 847 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 PFKLP17858 780 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 GNAZP19086 355 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 ITGAXP20702 1163 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 CDH13P55290 713 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 FPGSQ05932 587 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 AARS2Q5JTZ9 985 aaKnown RBP24.76■■□□□ 1.55
CLK2-203ENST00000368361 FAR2Q96K12 515 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 LMLNQ96KR4 655 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 PANX3Q96QZ0 392 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 A0A0J9YYE9 177 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 KERAO60938 352 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 VPS26AO75436 327 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 TRBC1P01850 177 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 BMPR1AP36894 532 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 CSNK1DP48730 415 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 TEAD2Q15562 447 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 EML3Q32P44 896 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 PITRM1Q5JRX3 1037 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 CLEC6AQ6EIG7 209 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 NET1Q7Z628 596 aaPredicted RBP24.76■■□□□ 1.55
CLK2-203ENST00000368361 AFAP1L2Q8N4X5 818 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 PAF1Q8N7H5 531 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 CEP70Q8NHQ1 597 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 STAG3L4Q8TBR4 150 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 KCNV2Q8TDN2 545 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 POF1BQ8WVV4 589 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 TACO1Q9BSH4 297 aaKnown RBP24.76■■□□□ 1.55
CLK2-203ENST00000368361 RNF112Q9ULX5 631 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 SLC30A1Q9Y6M5 507 aa24.76■■□□□ 1.55
CLK2-203ENST00000368361 CIB2O75838 187 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 IGSF6O95976 241 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 ARSAP15289 507 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 SATB1Q01826 763 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 CACNG1Q06432 222 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 TSNQ15631 228 aaKnown RBP24.75■■□□□ 1.55
CLK2-203ENST00000368361 TMEM240Q5SV17 173 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 OR2AP1Q8NGE2 309 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 GIMAP7Q8NHV1 300 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 SP7Q8TDD2 431 aaPredicted RBP24.75■■□□□ 1.55
CLK2-203ENST00000368361 RTKNQ9BST9 563 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 MEAF6Q9HAF1 191 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 ZFYVE1Q9HBF4 777 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 TRAF6Q9Y4K3 522 aa24.75■■□□□ 1.55
CLK2-203ENST00000368361 C1orf232A0A0U1RR37 186 aa24.74■■□□□ 1.55
CLK2-203ENST00000368361 RGSL1A5PLK6 1076 aa24.74■■□□□ 1.55
CLK2-203ENST00000368361 CDC7O00311 574 aa24.74■■□□□ 1.55
CLK2-203ENST00000368361 TLL1O43897 1013 aa24.74■■□□□ 1.55
CLK2-203ENST00000368361 MOSPD3O75425 235 aa24.74■■□□□ 1.55
CLK2-203ENST00000368361 SRCP12931 536 aa24.74■■□□□ 1.55
CLK2-203ENST00000368361 GFAPP14136 432 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms