RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 GPR50Q13585 617 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 DLG2Q15700 870 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MEGF11A6BM72 1044 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BTBD17A6NE02 478 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 GH2P01242 217 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 EPOP01588 193 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BMP2P12643 396 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BIKQ13323 160 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 GRM4Q14833 912 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NKAPQ8N5F7 415 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 POM121Q96HA1 1249 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NXF2Q9GZY0 626 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 WDR41Q9HAD4 459 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ABCB8Q9NUT2 735 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 VAPAQ9P0L0 249 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ADAMTS1Q9UHI8 967 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 LEF1Q9UJU2 399 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TLR2O60603 784 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CD96P40200 585 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BCAR1P56945 870 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 COL28A1Q2UY09 1125 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 KAT2AQ92830 837 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TBCDQ9BTW9 1192 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 Q3C1V9 767 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CHMP1BQ7LBR1 199 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RYBPQ8N488 228 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CORO2AQ92828 525 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FSD1LQ9BXM9 530 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 A0A0X1KG70 313 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SLC9A3R1O14745 358 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HOXA2O43364 376 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HRGP04196 525 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FAM86B2P0C5J1 330 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PPP4CP60510 307 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 DGKDQ16760 1214 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 IMPG1Q17R60 797 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PAN3Q58A45 887 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MPP7Q5T2T1 576 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PRSS48Q7RTY5 328 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FAM163AQ96GL9 167 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 KCNE2Q9Y6J6 123 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ABATP80404 500 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RHEBQ15382 184 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RNF212Q495C1 297 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CHST9Q7L1S5 443 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ATG9AQ7Z3C6 839 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FBXW8Q8N3Y1 598 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TBC1D10AQ9BXI6 508 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HMX1Q9NP08 348 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM5Q9Y2B1 443 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 OTCP00480 354 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MLLT6P55198 1093 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CDC20Q12834 499 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TSPYL5Q86VY4 417 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 KCTD13Q8WZ19 329 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 COA7Q96BR5 231 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TBC1D17Q9HA65 648 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 DYNLT1P63172 113 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BEND7Q8N7W2 519 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SLC7A6Q92536 515 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ZBTB8AQ96BR9 441 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PLEKHA8Q96JA3 519 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PUS7LQ9H0K6 701 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM210A6NLX4 147 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 AGAP14A8MT82 685 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FAM69CQ0P6D2 419 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TPGS1Q6ZTW0 290 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CYP2W1Q8TAV3 490 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 DHRS1Q96LJ7 313 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CCDC106Q9BWC9 280 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MINDY3Q9H8M7 445 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ACOT9Q9Y305 439 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BTN3A1O00481 513 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CDH11P55287 796 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RBBP4Q09028 425 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 DARS2Q6PI48 645 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CREG2Q8IUH2 290 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PAQR8Q8TEZ7 354 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HRH2P25021 359 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PDK3Q15120 406 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM41BQ5BJD5 291 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SLFN11Q7Z7L1 901 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NSMAFQ92636 917 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SLC38A3Q99624 504 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 THG1LQ9NWX6 298 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 A0A075B6Q4 140 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NR2F6P10588 404 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BTN3A2P78410 334 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 VRK3Q8IV63 474 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SLC13A3Q8WWT9 602 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ANKRD34BA5PLL1 514 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PITPNM1O00562 1244 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 IL2RBP14784 551 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RORCP51449 518 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 EARS2Q5JPH6 523 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF618Q5T7W0 954 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 GPR158Q5T848 1215 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 LAYNQ6UX15 382 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FRMD7Q6ZUT3 714 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms