RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 CPOXP36551 454 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 PEX19P40855 299 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 IDH3AP50213 366 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 SERPINB8P50452 374 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 C10orf107Q8IVU9 208 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 MFSD6LQ8IWD5 586 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 BLOC1S5Q8TDH9 187 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 WFIKKN2Q8TEU8 576 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 UCMAQ8WVF2 138 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 JADE3Q92613 823 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 GATA6Q92908 595 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 TTC1Q99614 292 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CEP44Q9C0F1 390 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 NSMCE4AQ9NXX6 385 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CCNT2O60583 730 aaKnown RBP13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 H2AFYO75367 372 aaKnown RBP13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 TULP3O75386 442 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 FESP07332 822 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CRABP2P29373 138 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 EPHB1P54762 984 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 RAD51Q06609 339 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 BCL2L1Q07817 233 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 TRAF2Q12933 501 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 PTPRRQ15256 657 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 HSP90AA5PQ58FG0 334 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CFAP157Q5JU67 520 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CPA6Q8N4T0 437 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 PCDH20Q8N6Y1 951 aaKnown RBP13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 LPCAT1Q8NF37 534 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 OR2AP1Q8NGE2 309 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 BRSK1Q8TDC3 778 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 CYB5D2Q8WUJ1 264 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 ECSITQ9BQ95 431 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 ATP13A3Q9H7F0 1226 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 S100A14Q9HCY8 104 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.14□□□□□ -0.316e-9■■■□□ 16.2
SQSTM1-201ENST00000360718 TMEM216Q9P0N5 145 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 MID2Q9UJV3 735 aa13.14□□□□□ -0.31
SQSTM1-201ENST00000360718 ANTXRLA6NF34 631 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 VAPBO95292 243 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 CRTAMO95727 393 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 F7P08709 466 aaPredicted RBP13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 PIRTP0C851 137 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 CNGA3Q16281 694 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 C11orf91Q3C1V1 193 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 TSTD2Q5T7W7 516 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 METTL21CQ5VZV1 264 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ESRP1Q6NXG1 681 aaKnown RBP13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 C22orf39Q6P5X5 142 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 IZUMO2Q6UXV1 221 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 SUSD6Q92537 303 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 NECTIN4Q96NY8 510 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 TRAPPC9Q96Q05 1148 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 RBBP8Q99708 897 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 CCDC28BQ9BUN5 200 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 PNPOQ9NVS9 261 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 DEC1Q9P2X7 70 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 SLC2A6Q9UGQ3 507 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 EVLQ9UI08 416 aaPredicted RBP13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ASLP04424 464 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 PSMC3P17980 439 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 NCF2P19878 526 aaPredicted RBP13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 SERPINA4P29622 427 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 RECQLP46063 649 aaPredicted RBP13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 SLC25A3Q00325 362 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 DLG2Q15700 870 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ARMC12Q5T9G4 340 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 KIAA0930Q6ICG6 404 aaPredicted RBP13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 OR52E8Q6IFG1 317 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ACTRT2Q8TDY3 377 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 PEX13Q92968 403 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 NXPE3Q969Y0 559 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ISL2Q96A47 359 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ELSPBP1Q96BH3 223 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 MYO19Q96H55 970 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 MRGPRX3Q96LB0 322 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 SORT1Q99523 831 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 CIPCQ9C0C6 399 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 FAM192AQ9GZU8 254 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 SNX15Q9NRS6 342 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 IARS2Q9NSE4 1012 aaKnown RBP13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 TREX1Q9NSU2 369 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 ERVW-1Q9UQF0 538 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 SLC27A6Q9Y2P4 619 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 PSAT1Q9Y617 370 aa13.13□□□□□ -0.31
SQSTM1-201ENST00000360718 GRXCR2A6NFK2 248 aa13.12□□□□□ -0.31
SQSTM1-201ENST00000360718 MROH6A6NGR9 719 aa13.12□□□□□ -0.31
SQSTM1-201ENST00000360718 PRRT4C9JH25 899 aa13.12□□□□□ -0.31
SQSTM1-201ENST00000360718 BNIP3LO60238 219 aa13.12□□□□□ -0.31
SQSTM1-201ENST00000360718 SOCS5O75159 536 aa13.12□□□□□ -0.31
SQSTM1-201ENST00000360718 HADHAP40939 763 aa13.12□□□□□ -0.31
SQSTM1-201ENST00000360718 LIMK2P53671 638 aa13.12□□□□□ -0.31
SQSTM1-201ENST00000360718 XIAPP98170 497 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms