RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FOXD2O60548 495 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TTC29Q8NA56 475 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 DENND6BQ8NEG7 585 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 STON2Q8WXE9 905 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TMBIM1Q969X1 311 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 VAT1Q99536 393 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ARPC5LQ9BPX5 153 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GLI2P10070 1586 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SNX4O95219 450 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CYP3A4P08684 503 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CETPP11597 493 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 PEPDP12955 493 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 BCAT1P54687 386 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TTLL9Q3SXZ7 439 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CHSY3Q70JA7 882 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MEIOBQ8N635 442 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GPRASP2Q96D09 838 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ADGRE3Q9BY15 652 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MKRN2Q9H000 416 aaKnown RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CEPT1Q9Y6K0 416 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MICAL2O94851 1124 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 DNAJB2P25686 324 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SLC9B1Q4ZJI4 515 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SNAP47Q5SQN1 464 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GPR63Q9BZJ6 419 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 KPNA3O00505 521 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ICMTO60725 284 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GABARAPL2P60520 117 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SLC9A9Q8IVB4 645 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SLC38A2Q96QD8 506 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SDCBP2Q9H190 292 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SAE1Q9UBE0 346 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SCAF8Q9UPN6 1271 aaKnown RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MYO3AQ8NEV4 1616 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 EFCAB6Q5THR3 1501 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ANKRD33BA6NCL7 494 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 H3BNH8 94 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 BBOX1O75936 387 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 AP3S2P59780 193 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 RFTN1Q14699 578 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 Q3C1V9 767 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MGAT5BQ3V5L5 792 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 AFTPHQ6ULP2 937 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 DEF8Q6ZN54 512 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TBC1D19Q8N5T2 526 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SRFBP1Q8NEF9 429 aaKnown RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 OR52E6Q96RD3 313 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 PFDN5Q99471 154 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CLPBQ9H078 707 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 RIOX1Q9H6W3 641 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MED11Q9P086 117 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TRAF6Q9Y4K3 522 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GJA3Q9Y6H8 435 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MAU2Q9Y6X3 613 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TET1Q8NFU7 2136 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 OR6C70A6NIJ9 312 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CSF1RP07333 972 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TPSB2P20231 275 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SLC13A2Q13183 592 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SIM2Q14190 667 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TPSAB1Q15661 275 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 FBXO33Q7Z6M2 555 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 KIF18BQ86Y91 864 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SLITRK2Q9H156 845 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 RASSF1Q9NS23 344 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ANGPT4Q9Y264 503 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 FXYD6-FXYD2A0A087WZ82 144 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 A0A088AWK7 358 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SLITRK5O94991 958 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ITGB1P05556 798 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PROZP22891 400 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 MZF1P28698 734 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 IFNGR2P38484 337 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ACSM2AQ08AH3 577 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 RPA4Q13156 261 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 IER5Q5VY09 327 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 OLFML2AQ68BL7 652 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ACSM2BQ68CK6 577 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 THEM5Q8N1Q8 247 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ADAM32Q8TC27 787 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 TRPM4Q8TD43 1214 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 TRUB1Q8WWH5 349 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 FXYD6Q9H0Q3 95 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SLC39A1Q9NY26 324 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 GTF2A1LQ9UNN4 478 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 B3GNT3Q9Y2A9 372 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 A0A0J9YYE9 177 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 B8ZZF3 427 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 WNT7AO00755 349 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CASKO14936 926 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 NNMTP40261 264 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PGDP52209 483 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 POLR2JP52435 117 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 RPL38P63173 70 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PPP3CAQ08209 521 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SNAPC2Q13487 334 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 TIGD6Q17RP2 521 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 GMIPQ9P107 970 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 TJP2Q9UDY2 1190 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CEMIPQ8WUJ3 1361 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms