RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CLDN25C9JDP6 229 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 SLC28A2O43868 658 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 B4GALT4O60513 344 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 XYLBO75191 536 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 TULP3O75386 442 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 RPP40O75818 363 aaKnown RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 OR5F1O95221 314 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 SEPHS1P49903 392 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 ABRQ12979 859 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 PPM1JQ5JR12 505 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 PIK3C3Q8NEB9 887 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 ROPN1LQ96C74 230 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 ABCG8Q9H221 673 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 LRTM1Q9HBL6 345 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 TCEA2Q15560 299 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 CCNYL2Q5T2Q4 361 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 KLHL24Q6TFL4 600 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 RALGPS2Q86X27 583 aaPredicted RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 AHI1Q8N157 1196 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 NETO2Q8NC67 525 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 CXorf40AQ8TE69 158 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 B4GALT5O43286 388 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 SDC2P34741 201 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 KIR3DL1P43629 444 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 MEIOBQ8N635 442 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 BSNDQ8WZ55 320 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 TSSK3Q96PN8 268 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 SDCBP2Q9H190 292 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 KIF20BQ96Q89 1820 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 FAM92AA1XBS5 289 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 NPEPPSL1A6NEC2 478 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 CLDN5O00501 218 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 TBL1XO60907 577 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 MAGP20916 626 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 GPR1P46091 355 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 GBE1Q04446 702 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 PPM1LQ5SGD2 360 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 DCLRE1AQ6PJP8 1040 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 P2RY8Q86VZ1 359 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 HJURPQ8NCD3 748 aaPredicted RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 COPS5Q92905 334 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 MRPL45Q9BRJ2 306 aaKnown RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 TRIT1Q9H3H1 467 aaKnown RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 ALG2Q9H553 416 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 ZNF490Q9ULM2 529 aaPredicted RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 NCKAP1Q9Y2A7 1128 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 FOXO6A8MYZ6 492 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 AP2A1O95782 977 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 PKMP14618 531 aaKnown RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 FAUP35544 74 aaKnown RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 HADHBP55084 474 aaKnown RBP14.8□□□□□ -0.04
CHD4-201ENST00000357008 SOCS4Q8WXH5 440 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 EXOC2Q96KP1 924 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 NODALQ96S42 347 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 TPK1Q9H3S4 243 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 RMI1Q9H9A7 625 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 RAB23Q9ULC3 237 aa14.8□□□□□ -0.04
CHD4-201ENST00000357008 RIC1Q4ADV7 1423 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 UGT2B17O75795 530 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 TRBC1P01850 177 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 TCAIMQ8N3R3 496 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.79□□□□□ -0.045e-9■□□□□ 8.2
CHD4-201ENST00000357008 ERAL1O75616 437 aaKnown RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 PIK3R6Q5UE93 754 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 LRTOMTQ8WZ04 291 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 CHRAC1Q9NRG0 131 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 FETUBQ9UGM5 382 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 PCDHB1Q9Y5F3 818 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 C5orf60A6NFR6 353 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 HOXA10P31260 410 aaPredicted RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 ANKRD22Q5VYY1 191 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 RPTNQ6XPR3 784 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 STOML2Q9UJZ1 356 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 DIP2CQ9Y2E4 1556 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 BCL9O00512 1426 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 FAM149AA5PLN7 773 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 URADA6NGE7 173 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 LRRC14BA6NHZ5 514 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 PRMT5O14744 637 aaPredicted RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 PAGE1O75459 146 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 FABP3P05413 133 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 CSH1P0DML2 217 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 CSH2P0DML3 217 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 IDH3AP50213 366 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 AQP4P55087 323 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 TAS2R41P59536 307 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 POU5F1Q01860 360 aaKnown RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 GRM3Q14832 879 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 RFTN2Q52LD8 501 aaPredicted RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 TNFAIP8L3Q5GJ75 292 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 LDLRAP1Q5SW96 308 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 RAET1GQ6H3X3 334 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 SATL1Q86VE3 508 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 CCDC36Q8IYA8 594 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 MRPL17Q9NRX2 175 aaKnown RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 PCDHB9Q9Y5E1 797 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 GMEB1Q9Y692 573 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 A0A1W2PRG6 482 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 SLC9A3R1O14745 358 aaPredicted RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 CHST10O43529 356 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms