RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CST8O60676 142 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 DNAJC6O75061 913 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 TCEA3O75764 348 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 ECEL1O95672 775 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 CA5AP35218 305 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 ABCG1P45844 678 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 SPINT3P49223 89 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 SPIDRQ14159 915 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 PCSK7Q16549 785 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 PYCR3Q53H96 274 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 AADACL2Q6P093 401 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 FOXR1Q6PIV2 292 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF765Q7L2R6 523 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 CCNJLQ8IV13 435 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 GPR26Q8NDV2 337 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 ACRBPQ8NEB7 543 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 SCG3Q8WXD2 468 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 GORASP1Q9BQQ3 440 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 LACRTQ9GZZ8 138 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 PRORYQ9H606 182 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 GLOD4Q9HC38 313 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 DDX56Q9NY93 547 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 LRIT1Q9P2V4 623 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 APPL1Q9UKG1 709 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 SHOC2Q9UQ13 582 aa16.63■□□□□ 0.25
PDLIM7-201ENST00000355572 CDRT15L2A8MXV6 281 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 PPM1DO15297 605 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 PSTPIP1O43586 416 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 GLB1P16278 677 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 CES1P23141 567 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 ACTN2P35609 894 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 OR1D5P58170 312 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 TLE3Q04726 772 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 PDK1Q15118 436 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 TEX44Q53QW1 395 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 KDELC1Q6UW63 502 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 TMEM139Q8IV31 216 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 ARL14Q8N4G2 192 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 ZDHHC1Q8WTX9 485 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF830Q96NB3 372 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 SLC46A1Q96NT5 459 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 OR2M4Q96R27 311 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 GFM1Q96RP9 751 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 MLPHQ9BV36 600 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 MAK16Q9BXY0 300 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 SLC25A51Q9H1U9 297 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 TRNAU1APQ9NX07 287 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 TMPRSS11EQ9UL52 423 aa16.62■□□□□ 0.25
PDLIM7-201ENST00000355572 NDUFA10O95299 355 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 SLC4A1P02730 911 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 NFKB1P19838 968 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 ETV5P41161 510 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 CHRNA4P43681 627 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 RPL26P61254 145 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 CFHR1Q03591 330 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 KHDC1Q4VXA5 237 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 ALS2CLQ60I27 953 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF574Q6ZN55 896 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 MICALCLQ6ZW33 695 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 NT5DC3Q86UY8 548 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 ZC3H18Q86VM9 953 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 NLRP8Q86W28 1048 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF761Q86XN6 746 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 KATNAL2Q8IYT4 538 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 OXNAD1Q96HP4 312 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 TEKT5Q96M29 485 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 NUDT22Q9BRQ3 303 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 HEMGNQ9BXL5 484 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 SEMA6CQ9H3T2 930 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 RDH14Q9HBH5 336 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 EPB41L5Q9HCM4 733 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 KCTD5Q9NXV2 234 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 RPL26L1Q9UNX3 145 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 SDK2Q58EX2 2172 aa16.61■□□□□ 0.25
PDLIM7-201ENST00000355572 BPTFQ12830 3046 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 IGSF10Q6WRI0 2623 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 TRBV23OR9-2A0A075B6M9 112 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 CCDC187A0A096LP49 1063 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 PDE2AO00408 941 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 PPP1R12AO14974 1030 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 PMPCBO75439 489 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 ITIH1P19827 911 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 ACTR1BP42025 376 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 ACTR1AP61163 376 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 ZFP36L1Q07352 338 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 C11orf63Q6NUN7 778 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 IGF2-ASQ6U949 168 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF438Q7Z4V0 828 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 TMC3Q7Z5M5 1100 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 SLITRK4Q8IW52 837 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 NRSN1Q8IZ57 195 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF567Q8N184 647 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 LIN37Q96GY3 246 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF578Q96N58 590 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 FAM118BQ9BPY3 351 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 GSDMCQ9BYG8 508 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 TMEM9Q9P0T7 183 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms