RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 BLKP51451 505 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TAS2R40P59535 323 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CXCL9Q07325 125 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ACSM2AQ08AH3 577 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FOXI1Q12951 378 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 KLF10Q13118 480 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 KCNC3Q14003 757 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SETMARQ53H47 684 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC158Q5M9N0 1113 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CC2D1BQ5T0F9 858 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ACSM2BQ68CK6 577 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CNSTQ6PJW8 725 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 POLNQ7Z5Q5 900 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CEP57Q86XR8 500 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TICAM1Q8IUC6 712 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 RND1Q92730 232 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GRAMD2BQ96HH9 432 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GDAP1L1Q96MZ0 367 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SPAG5Q96R06 1193 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MYCBPQ99417 103 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PCYT2Q99447 389 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FSD1Q9BTV5 496 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 NPFFR1Q9GZQ6 430 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SLCO5A1Q9H2Y9 848 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TRIM36Q9NQ86 728 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MBNL1Q9NR56 388 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SERTAD4Q9NUC0 356 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ARL8BQ9NVJ2 186 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CISD1Q9NZ45 108 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 NINJ2Q9NZG7 142 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ARMCX3Q9UH62 379 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 HACL1Q9UJ83 578 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 UHRF1BP1Q6BDS2 1440 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 COL22A1Q8NFW1 1626 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 EDDM13A0A1B0GTR0 161 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 C5orf51A6NDU8 294 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FAM157AC9JC47 383 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 USP17L23D6RBM5 183 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 DDX39AO00148 427 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CSPG5O95196 566 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CLDN7O95471 211 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 OLFM2O95897 454 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TRUB2O95900 331 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 EGR2P11161 476 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 HOXC8P31273 242 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 UBASH3AP57075 661 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GUCY1B3Q02153 619 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ITGA7Q13683 1181 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 BMPR2Q13873 1038 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MEP1BQ16820 701 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MYLK3Q32MK0 819 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CRY2Q49AN0 593 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FAM98BQ52LJ0 330 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PARP10Q53GL7 1025 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF385BQ569K4 471 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CST9LP1Q5W188 147 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SARM1Q6SZW1 724 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM182Q6ZP80 229 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 C1orf186Q6ZWK4 172 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SPATA19Q7Z5L4 167 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 C16orf71Q8IYS4 520 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 RASGEF1CQ8N431 466 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 HORMAD2Q8N7B1 307 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 IPMKQ8NFU5 416 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 WDR20Q8TBZ3 569 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SLC25A43Q8WUT9 341 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 REPS1Q96D71 796 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SIN3AQ96ST3 1273 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PI4K2AQ9BTU6 479 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 POLDIP3Q9BY77 421 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 DNAI2Q9GZS0 605 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GPR108Q9NPR9 543 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TBCCD1Q9NVR7 557 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GDE1Q9NZC3 331 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TSPYL4Q9UJ04 414 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF148Q9UQR1 794 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MTMR6Q9Y217 621 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ROBO1Q9Y6N7 1651 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 TRIM77I1YAP6 450 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 CAPN9O14815 690 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 HCRTR2O43614 444 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF623O75123 536 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 NDUFS3O75489 264 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 SLC25A12O75746 678 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 NEURL1O76050 574 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 MT-CYBP00156 380 aaPredicted RBP1.65□□□□□ -2.14
BRCA1-202ENST00000354071 CTPS1P17812 591 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 BMP7P18075 431 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 MPZP25189 248 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 PTH2RP49190 550 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 CCT8P50990 548 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 ALDH3A2P51648 485 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 ACSM1Q08AH1 577 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 AIMP2Q13155 320 aaKnown RBP1.65□□□□□ -2.14
BRCA1-202ENST00000354071 RPA4Q13156 261 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 OLIG2Q13516 323 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 NAE1Q13564 534 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 ENTPD8Q5MY95 495 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 ALS2CLQ60I27 953 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 HMBOX1Q6NT76 420 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms