RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MUC13Q9H3R2 512 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 C8orf4Q9NR00 106 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 Q9Y3F1 56 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 HEMK1Q9Y5R4 338 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-202ENST00000352393 ACOX3O15254 700 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 TPST1O60507 370 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 CHRNA1P02708 482 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 GALK1P51570 392 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 MS4A13Q5J8X5 152 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 DCP1BQ8IZD4 617 aaKnown RBP24.44■■□□□ 1.5
CPNE1-202ENST00000352393 MUC3BQ9H195 1237 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 OAZ3Q9UMX2 235 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 BTRCQ9Y297 605 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 GPR45Q9Y5Y3 372 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 hCG_2014768A0A024R1R8 64 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 CCDC162PA2VCL2 907 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 CLASP2O75122 1294 aaKnown RBP24.44■■□□□ 1.5
CPNE1-202ENST00000352393 ITGB1P05556 798 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 MRPL19P49406 292 aaKnown RBP24.44■■□□□ 1.5
CPNE1-202ENST00000352393 ESRRGP62508 458 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 CTBSQ01459 385 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 CCL14Q16627 93 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 OGFOD2Q6N063 350 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 MRNIPQ6NTE8 343 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 GPR180Q86V85 440 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 TRPV3Q8NET8 790 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 TSPEARQ8WU66 669 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 SEPT8Q92599 483 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.44■■□□□ 1.52e-16■■■■□ 24.6
CPNE1-202ENST00000352393 EBF1Q9UH73 591 aa24.44■■□□□ 1.5
CPNE1-202ENST00000352393 ZFC3H1O60293 1989 aaKnown RBP24.44■■□□□ 1.5
CPNE1-202ENST00000352393 TCRBV5S2A0A599 114 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 VPS4BO75351 444 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 LINC00032P0C843 101 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 PRR35P0CG20 571 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 FCGR1AP12314 374 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 LCP2Q13094 533 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 PTPRCAPQ14761 206 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 TMTC4Q5T4D3 741 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 IL31Q6EBC2 164 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 PTRH1Q86Y79 214 aaKnown RBP24.43■■□□□ 1.5
CPNE1-202ENST00000352393 CLVS1Q8IUQ0 354 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-202ENST00000352393 PTPN18Q99952 460 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 AARSD1Q9BTE6 412 aaKnown RBP24.43■■□□□ 1.5
CPNE1-202ENST00000352393 IRAK4Q9NWZ3 460 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 ARL5AQ9Y689 179 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 IGLV3-10A0A075B6K4 115 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 A0A1B0GTL3 188 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 ASPDHA6ND91 283 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 KERAO60938 352 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 RPP40O75818 363 aaKnown RBP24.43■■□□□ 1.5
CPNE1-202ENST00000352393 OGNP20774 298 aaKnown RBP24.43■■□□□ 1.5
CPNE1-202ENST00000352393 GSK3BP49841 420 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 NUP107P57740 925 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 SUSD3Q96L08 255 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 ZNF408Q9H9D4 720 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 CD320Q9NPF0 282 aa24.43■■□□□ 1.5
CPNE1-202ENST00000352393 GJB3O75712 270 aa24.42■■□□□ 1.5
CPNE1-202ENST00000352393 TBX4P57082 545 aa24.42■■□□□ 1.5
CPNE1-202ENST00000352393 CLCQ05315 142 aa24.42■■□□□ 1.5
CPNE1-202ENST00000352393 TUSC3Q13454 348 aa24.42■■□□□ 1.5
CPNE1-202ENST00000352393 RCAN2Q14206 197 aa24.42■■□□□ 1.5
CPNE1-202ENST00000352393 TRIM8Q9BZR9 551 aa24.42■■□□□ 1.5
CPNE1-202ENST00000352393 OAS3Q9Y6K5 1087 aaKnown RBP24.42■■□□□ 1.5
CPNE1-202ENST00000352393 SCN10AQ9Y5Y9 1956 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 RNF103-CHMP3A0A140T963 221 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 A0A1W2PP18 115 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 MGEA5O60502 916 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 PFDN1O60925 122 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 ZNF623O75123 536 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 FGF1P05230 155 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 TYMPP19971 482 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 EEF1DP29692 281 aaKnown RBP24.41■■□□□ 1.5
CPNE1-202ENST00000352393 RFC2P35250 354 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 ZFP36L2P47974 494 aaKnown RBP24.41■■□□□ 1.5
CPNE1-202ENST00000352393 APLP1P51693 650 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 DIO3P55073 304 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 RPS6KA2Q15349 733 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 TYSND1Q2T9J0 566 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 OR13C4Q8NGS5 318 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 BLOC1S5Q8TDH9 187 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 KIAA1191Q96A73 305 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 CATSPERZQ9NTU4 200 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 LMCD1Q9NZU5 365 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 CDH7Q9ULB5 785 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 SCML2Q9UQR0 700 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 F8W810 466 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 MTHFD1P11586 935 aaKnown RBP24.41■■□□□ 1.5
CPNE1-202ENST00000352393 HLA-DPA1P20036 260 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 PAX3P23760 479 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 STC1P52823 247 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 IL10RBQ08334 325 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 MGAT3Q09327 533 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 KLHL35Q6PF15 583 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 SPATA19Q7Z5L4 167 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 ZNF354CQ86Y25 554 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 SCN4BQ8IWT1 228 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 PAPD5Q8NDF8 572 aaKnown RBP24.41■■□□□ 1.5
CPNE1-202ENST00000352393 C12orf43Q96C57 262 aaKnown RBP24.41■■□□□ 1.5
CPNE1-202ENST00000352393 FBXL20Q96IG2 436 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms