RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 CCDC117Q8IWD4 279 aaPredicted RBP9.76□□□□□ -0.85
MRPL55-204ENST00000348259 ATP6V0D2Q8N8Y2 350 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 CHST14Q8NCH0 376 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 MCUQ8NE86 351 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 MAPK15Q8TD08 544 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 UBLCP1Q8WVY7 318 aaPredicted RBP9.76□□□□□ -0.85
MRPL55-204ENST00000348259 HTR3CQ8WXA8 447 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 CPT1BQ92523 772 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 FATE1Q969F0 183 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 HDAC11Q96DB2 347 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 TTC25Q96NG3 672 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 TSGA13Q96PP4 275 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 VAT1Q99536 393 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 ROPN1BQ9BZX4 212 aaPredicted RBP9.76□□□□□ -0.85
MRPL55-204ENST00000348259 KLC2Q9H0B6 622 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 CATSPERBQ9H7T0 1116 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 ROPN1Q9HAT0 212 aaPredicted RBP9.76□□□□□ -0.85
MRPL55-204ENST00000348259 ZNF212Q9UDV6 495 aa9.76□□□□□ -0.85
MRPL55-204ENST00000348259 UNC13CQ8NB66 2214 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CLEC18AA5D8T8 446 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 DRGXA6NNA5 263 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 A6NNZ2 444 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 H3BQF6 201 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 K7ERQ8 282 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 SUV39H1O43463 412 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 SMAD6O43541 496 aaKnown RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 MFSD11O43934 449 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 ITGA2BP08514 1039 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 ABHD2P08910 425 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 EPHB2P29323 1055 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 AKT2P31751 481 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 FDFT1P37268 417 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 VPS41P49754 854 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 OXCT1P55809 520 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 PFN3P60673 137 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 EIF2B5Q13144 721 aaKnown RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 KCNJ11Q14654 390 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CDKN3Q16667 212 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 ZNF542PQ5EBM4 170 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 COLEC12Q5KU26 742 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 AFMIDQ63HM1 303 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 DENND2CQ68D51 928 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CLEC18BQ6UXF7 455 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC81Q6ZN84 652 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 RBM44Q6ZP01 1051 aaKnown RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CENPUQ71F23 418 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 ERN2Q76MJ5 926 aaKnown RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 EFL1Q7Z2Z2 1120 aaKnown RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 C14orf80Q86SX3 495 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 PRUNE1Q86TP1 453 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 PARGQ86W56 976 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 SLC35F3Q8IY50 421 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CLEC18CQ8NCF0 446 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 WDR36Q8NI36 951 aaKnown RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 TBC1D31Q96DN5 1066 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC97Q96F63 343 aaPredicted RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 LIN37Q96GY3 246 aaPredicted RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 TBATAQ96M53 351 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 SPATA13Q96N96 652 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 LENG8Q96PV6 779 aaPredicted RBP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 RBM15Q96T37 977 aaKnown RBP eCLIP9.75□□□□□ -0.85
MRPL55-204ENST00000348259 SEMA3CQ99985 751 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 C10orf88Q9H8K7 445 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 SLC25A13Q9UJS0 675 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 TRHDEQ9UKU6 1024 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 PCDHGA7Q9Y5G6 932 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 HS3ST4Q9Y661 456 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 WASF2Q9Y6W5 498 aa9.75□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC187A0A096LP49 1063 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 AQP9O43315 295 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 AP1G1O43747 822 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 SNAP91O60641 907 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ZMPSTE24O75844 475 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 RHOQP17081 205 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 TPSB2P20231 275 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 CCNCP24863 283 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 RBMS1P29558 406 aaKnown RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 OAS2P29728 719 aaKnown RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 GARSP41250 739 aaKnown RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 MAGEA4P43358 317 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ARL4CP56559 192 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ZNF844Q08AG5 666 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 SRSF6Q13247 344 aaKnown RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 SEMA5AQ13591 1074 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 AUHQ13825 339 aaKnown RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 SLC29A2Q14542 456 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 TPSAB1Q15661 275 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 HIF1AQ16665 826 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 PARP6Q2NL67 630 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 RABGAP1LQ5R372 815 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ANKRD20A2Q5SQ80 823 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ANKRD20A1Q5TYW2 823 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 AGBL2Q5U5Z8 902 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ANKRD20A3Q5VUR7 823 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 LRRC31Q6UY01 552 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 NLRP14Q86W24 1093 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 PDIK1LQ8N165 341 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 UMODL1-AS1Q8N2C9 162 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ASB12Q8WXK4 309 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 LRRC39Q96DD0 335 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms