RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TYSND1Q2T9J0 566 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 HECTD3Q5T447 861 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 PSAPL1Q6NUJ1 521 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 AFTPHQ6ULP2 937 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 FUNDC1Q8IVP5 155 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 ST13P4Q8IZP2 240 aaPredicted RBP14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SLC43A3Q8NBI5 491 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 ELAC1Q9H777 363 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 TIMM22Q9Y584 194 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 RAI2Q9Y5P3 530 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 CASP8AP2Q9UKL3 1982 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 C15orf38-AP3S2A0A0A6YYH1 394 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 C2orf81A6NN90 581 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 KDELR3O43731 214 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 NIPSNAP2O75323 286 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 ECI2O75521 394 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 STC2O76061 302 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 PRLP01236 227 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 COL6A1P12109 1028 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 AGTR2P50052 363 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 ELAVL2Q12926 359 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 PLD1Q13393 1074 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 TRIM25Q14258 630 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 CYTH1Q15438 398 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SETMARQ53H47 684 aaPredicted RBP14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 ZRANB3Q5FWF4 1079 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SCIMPQ6UWF3 145 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 ARPINQ7Z6K5 226 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SIDT2Q8NBJ9 832 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SEPT8Q92599 483 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 DLG3Q92796 817 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 PEX13Q92968 403 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 CNBD2Q96M20 576 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 TDRD1Q9BXT4 1180 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 TUBB1Q9H4B7 451 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 CROTQ9UKG9 612 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 A0A0J9YYE9 177 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 PRSS51A0A1B0GVH4 220 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 C2orf78A6NCI8 922 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 SEC24AO95486 1093 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 MC4RP32245 332 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 POLE2P56282 527 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 RAD51Q06609 339 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 GK3PQ14409 553 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 TAF12Q16514 161 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 VPS26BQ4G0F5 336 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 C6orf52Q5T4I8 152 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 NAIF1Q69YI7 327 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 ALG1LQ6GMV1 187 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 DCBLD1Q8N8Z6 715 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 TTLL2Q9BWV7 592 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 RNF38Q9H0F5 515 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 TFB2MQ9H5Q4 396 aaKnown RBP14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 INTS10Q9NVR2 710 aaKnown RBP14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 KERAO60938 352 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 CLDN11O75508 207 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 GPX3P22352 226 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 CCL23P55773 120 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 CLCQ05315 142 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 TWF1Q12792 350 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 TAF1AQ15573 450 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 ACBD5Q5T8D3 534 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 THEMIS2Q5TEJ8 643 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 KIAA1841Q6NSI8 718 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 RETREG3Q86VR2 466 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 APLFQ8IW19 511 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 STAG3L4Q8TBR4 150 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 BTBD9Q96Q07 612 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 TRIM8Q9BZR9 551 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 SUCOQ9UBS9 1254 aaKnown RBP14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 AP4B1Q9Y6B7 739 aa14.82□□□□□ -0.04
VIPAS39-202ENST00000343765 ANKRD12Q6UB98 2062 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 PQBP1O60828 265 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 PENKP01210 267 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 HGFP14210 728 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 PRDX3P30048 256 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 CHN2P52757 468 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 SMARCB1Q12824 385 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 NRF1Q16656 503 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 MAP7D1Q3KQU3 841 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 RHEBL1Q8TAI7 183 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 KIAA1191Q96A73 305 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 TSEN34Q9BSV6 310 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 SYTL2Q9HCH5 934 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 POLG2Q9UHN1 485 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 IQCF5A8MTL0 148 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 TRIM24O15164 1050 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 HOXB8P17481 243 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 CR2P20023 1033 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 CHRM3P20309 590 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 GRIA2P42262 883 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 ALDH7A1P49419 539 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 BFSP2Q13515 415 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 CAPRIN1Q14444 709 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 C5orf22Q49AR2 442 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 UGT2A3Q6UWM9 527 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 TAS2R42Q7RTR8 314 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 DEFB128Q7Z7B8 93 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 LRTOMTQ8WZ04 291 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms