RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SLC7A8Q9UHI5 535 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 NEDD8-MDP1E9PL57 170 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 SOX1O00570 391 aaPredicted RBP18.53■□□□□ 0.56
HOXA9-201ENST00000343483 NEMP1O14524 444 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 HDAC3O15379 428 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 DCXO43602 365 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 NPHS1O60500 1241 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 MOSPD3O75425 235 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 HLA-FP30511 346 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 STK19P49842 368 aaPredicted RBP18.53■□□□□ 0.56
HOXA9-201ENST00000343483 SUOXP51687 545 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 EPHA5P54756 1037 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PITRM1Q5JRX3 1037 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 ZNF697Q5TEC3 545 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 RIPOR1Q6ZS17 1223 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 ISCA2Q86U28 154 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 TMEM25Q86YD3 366 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PHTF2Q8N3S3 785 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PHOSPHO2Q8TCD6 241 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PIH1D2Q8WWB5 315 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 EXT2Q93063 718 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PTERQ96BW5 349 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PANX3Q96QZ0 392 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 POPDC3Q9HBV1 291 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 TDP1Q9NUW8 608 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 STX18Q9P2W9 335 aaKnown RBP18.53■□□□□ 0.56
HOXA9-201ENST00000343483 GOLGA8QA0A0J9YX86 632 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.53■□□□□ 0.56
HOXA9-201ENST00000343483 GOLGA8OA6NCC3 632 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 GOLGA8NF8WBI6 632 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 BNIP3LO60238 219 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 TBX10O75333 385 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 IGSF6O95976 241 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 HNRNPLP14866 589 aaKnown RBP eCLIP18.53■□□□□ 0.56
HOXA9-201ENST00000343483 CD1DP15813 335 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 DDX6P26196 483 aaKnown RBP eCLIP18.53■□□□□ 0.56
HOXA9-201ENST00000343483 GCKP35557 465 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 VHLP40337 213 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 KCNC1P48547 511 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 TTPAP49638 278 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 NTHL1P78549 312 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PEX6Q13608 980 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 PTPRNQ16849 979 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 DGKKQ5KSL6 1271 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 C1orf146Q5VVC0 180 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 TAS2R42Q7RTR8 314 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 OR52B2Q96RD2 323 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 NUF2Q9BZD4 464 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 MAGEE1Q9HCI5 957 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 TCF7L2Q9NQB0 619 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 TAS2R13Q9NYV9 303 aa18.53■□□□□ 0.56
HOXA9-201ENST00000343483 A0A088AWK7 358 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 PFDN6O15212 129 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 GRM6O15303 877 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 GPR39O43194 453 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 OR1I1O60431 355 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 MYOGP15173 224 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 MAPK8P45983 427 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 HK2P52789 917 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 METTL21CQ5VZV1 264 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 RPS27LQ71UM5 84 aaKnown RBP18.52■□□□□ 0.56
HOXA9-201ENST00000343483 METTL3Q86U44 580 aaKnown RBP18.52■□□□□ 0.56
HOXA9-201ENST00000343483 EID2BQ96D98 161 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 CNDP1Q96KN2 507 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 WDR55Q9H6Y2 383 aaPredicted RBP18.52■□□□□ 0.56
HOXA9-201ENST00000343483 ATP13A3Q9H7F0 1226 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 GTSE1Q9NYZ3 720 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 IL17CQ9P0M4 197 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 VPS9D1Q9Y2B5 631 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 RWDD3Q9Y3V2 267 aa18.52■□□□□ 0.56
HOXA9-201ENST00000343483 ZNF821O75541 412 aaPredicted RBP18.51■□□□□ 0.55
HOXA9-201ENST00000343483 ARHGEF15O94989 841 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 HMGCLP35914 325 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 ACTR3P61158 418 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 CAMK1Q14012 370 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 NAA25Q14CX7 972 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 MUM1Q2TAK8 710 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 FUT11Q495W5 492 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 HABP4Q5JVS0 413 aaKnown RBP18.51■□□□□ 0.55
HOXA9-201ENST00000343483 SH2D4BQ5SQS7 431 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 SLC22A9Q8IVM8 553 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 BBS2Q9BXC9 721 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 YY1AP1Q9H869 796 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 DENND4CQ5VZ89 1909 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 C1orf232A0A0U1RR37 186 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 LOC100653049A0A140TA62 436 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 TMEM233B4DJY2 109 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 H3BMM5 538 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 H7C0S8 307 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 PER2O15055 1255 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 NVLO15381 856 aaKnown RBP18.51■□□□□ 0.55
HOXA9-201ENST00000343483 GRID2O43424 1007 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 KRT34O76011 436 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 SRCP12931 536 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 EPHA3P29320 983 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 PRDX6P30041 224 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 SERPINB5P36952 375 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 UBE3AQ05086 875 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 PDCD2Q16342 344 aaPredicted RBP18.51■□□□□ 0.55
HOXA9-201ENST00000343483 AARS2Q5JTZ9 985 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms