RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ABCC10Q5T3U5 1492 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ATP7AQ04656 1500 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ANAPC1Q9H1A4 1944 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 OR1I1O60431 355 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ERVK-10P10266 1014 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ACTR3P61158 418 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ERVK-8P63133 956 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 MAPKAPK3Q16644 382 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 CYB5R4Q7L1T6 521 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 TDRPQ86YL5 185 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 TREX2Q9BQ50 279 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 ZNF700Q9H0M5 742 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 TBC1D22BQ9NU19 505 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 BARHL2Q9NY43 387 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 SSTR3P32745 418 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 IFI35P80217 286 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 HTRA4P83105 476 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 E2F1Q01094 437 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 DSG2Q14126 1118 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ZNF782Q6ZMW2 699 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 MOB2Q70IA6 237 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 MOB1BQ7L9L4 216 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 OOSP2Q86WS3 158 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 TMEM192Q8IY95 271 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 OR7G1Q8NGA0 311 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 DCAF4Q8WV16 495 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 IPCEF1Q8WWN9 437 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 HOPXQ9BPY8 73 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 FNDC11Q9BVV2 318 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 SPATA9Q9BWV2 254 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 EIF5A2Q9GZV4 153 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 HCN3Q9P1Z3 774 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 PI4KBQ9UBF8 816 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ABCD2Q9UBJ2 740 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RBM7Q9Y580 266 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 CNOT1A5YKK6 2376 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 RALGAPA2Q2PPJ7 1873 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 A0A088AWK7 358 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 A8MVJ9 347 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 TPP1O14773 563 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 GSC2O15499 205 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 EYA4O95677 639 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 PLEKP08567 350 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 LINGO3P0C6S8 592 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ZNF10P21506 573 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 VLDLRP98155 873 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 FMR1Q06787 632 aaKnown RBP eCLIP6.15□□□□□ -1.42
VCAN-203ENST00000343200 PCDH1Q08174 1060 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 PTGR1Q14914 329 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 DSELQ8IZU8 1212 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 DHRS1Q96LJ7 313 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 C14orf166Q9Y224 244 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 PCDHGB6Q9Y5F9 930 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 OVOS2A0A0G2JMS6 1433 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 NPHP3-ACAD11A0A0J9YXS1 232 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 SLC22A2O15244 555 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 GMDSO60547 372 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RHOBTB3O94955 611 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ITGB1P05556 798 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 HMBSP08397 361 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RPS3P23396 243 aaKnown RBP eCLIP6.15□□□□□ -1.42
VCAN-203ENST00000343200 FMO4P31512 558 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 MAGEA11P43364 429 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 S100A10P60903 97 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RAB4BP61018 213 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RPL10AP62906 217 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 SCGB2A2Q13296 93 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 PDIA5Q14554 519 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 DDB1Q16531 1140 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RFTN2Q52LD8 501 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 KLHL26Q53HC5 615 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 BOLA3Q53S33 107 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 NDUFAF5Q5TEU4 345 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 PCSK9Q8NBP7 692 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 CCDC74AQ96AQ1 378 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RCN3Q96D15 328 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 DPAGT1Q9H3H5 408 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 POMKQ9H5K3 350 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 FBXO6Q9NRD1 293 aaPredicted RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 BLOC1S4Q9NUP1 217 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 KCNH4Q9UQ05 1017 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 RPTORQ8N122 1335 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 KAT7O95251 611 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 FCER2P06734 321 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 GPIP06744 558 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 NAT1P18440 290 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 CAPZA1P52907 286 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 PPP3R1P63098 170 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 MRPS10P82664 201 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 MC2RQ01718 297 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 XRRA1Q6P2D8 792 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 VSTM1Q6UX27 236 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 GTF2H5Q6ZYL4 71 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 LAPTM4BQ86VI4 370 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 ZC3H7AQ8IWR0 971 aaKnown RBP6.15□□□□□ -1.42
VCAN-203ENST00000343200 FAM20CQ8IXL6 584 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 PDZD9Q8IXQ8 264 aa6.15□□□□□ -1.42
VCAN-203ENST00000343200 MARVELD2Q8N4S9 558 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms