RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 TTPAP49638 278 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 FCGRTP55899 365 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 TMEM214Q6NUQ4 689 aaKnown RBP18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 PAQR3Q6TCH7 311 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 C8orf59Q8N0T1 100 aaPredicted RBP18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 BPIFB6Q8NFQ5 453 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 DAPK2Q9UIK4 370 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 AGO1Q9UL18 857 aaKnown RBP18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 POLR3HQ9Y535 204 aaPredicted RBP18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 A0A1B0GVG6 124 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 OR4F21O95013 312 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 ECT2LQ008S8 904 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 EID3Q8N140 333 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 CLHC1Q8NHS4 586 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 ASB8Q9H765 288 aa18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 PNMA8BQ9ULN7 279 aaPredicted RBP18.11■□□□□ 0.49
TNFAIP2-201ENST00000333007 NDST3O95803 873 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 PKMP14618 531 aaKnown RBP18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 UGT1A6P19224 532 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 LRRC74AQ0VAA2 488 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 SFRP1Q8N474 314 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 SMG8Q8ND04 991 aaKnown RBP18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 ZFAND2BQ8WV99 257 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 ROGDIQ9GZN7 287 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 RIBC2Q9H4K1 309 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 ARMC7Q9H6L4 198 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 HPS4Q9NQG7 708 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 EI24O14681 340 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 CLIC3O95833 236 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 KRT6AP02538 564 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 KRT6BP04259 564 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 PPP3CCP48454 512 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 KRT6CP48668 564 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 POLR2JP52435 117 aaKnown RBP18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 EIF2B4Q9UI10 523 aaKnown RBP18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 OAZ3Q9UMX2 235 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 ZNF197O14709 1029 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 GRID2O43424 1007 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 CNTN5O94779 1100 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 MLLT6P55198 1093 aaPredicted RBP18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 CPSF6Q16630 551 aaKnown RBP eCLIP18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 LDLRAP1Q5SW96 308 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 LINGO4Q6UY18 593 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 TMCO1Q9UM00 188 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 SH3BP1Q9Y3L3 701 aa18.1■□□□□ 0.49
TNFAIP2-201ENST00000333007 PTGESO14684 152 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 KCNH1O95259 989 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 DLGAP3O95886 979 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 JUNP05412 331 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SERPINB1P30740 379 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 MAGEA3P43357 314 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 HERVK_113P63132 956 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 BOP1Q14137 746 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SIRPB2Q5JXA9 342 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 MAVSQ7Z434 540 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 TBC1D21Q8IYX1 336 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SPPL2BQ8TCT7 592 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 CENPNQ96H22 339 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 ERVK-6Q9BXR3 956 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 RMND5AQ9H871 391 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SYNDIG1LA6NDD5 238 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 PABPC4LP0CB38 370 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 TRIM60Q495X7 471 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SYTL3Q4VX76 610 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 CPNE9Q8IYJ1 553 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 PCSK9Q8NBP7 692 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SOCS4Q8WXH5 440 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 ROPN1LQ96C74 230 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 CXorf21Q9HAI6 301 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SUCOQ9UBS9 1254 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 RBMX2Q9Y388 322 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 PTGDR2Q9Y5Y4 395 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 H7C4K7 107 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 CST1P01037 141 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 AP5B1Q2VPB7 878 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 ANKRD23Q86SG2 305 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 C2CD4AQ8NCU7 369 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SPATA17Q96L03 361 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 WDR6Q9NNW5 1121 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 TBKBP1A7MCY6 615 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 RGS14O43566 566 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 ZBTB11O95625 1053 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 CYBBP04839 570 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 S100A3P33764 101 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 RPS9P46781 194 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 YAP1P46937 504 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 CARTPTQ16568 116 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 ZNF789Q5FWF6 425 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 MARCH8Q5T0T0 291 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 TAGAPQ8N103 731 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 UROC1Q96N76 676 aa18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 SMPD3Q9NY59 655 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP2-201ENST00000333007 ULK1O75385 1050 aa18.08■□□□□ 0.49
TNFAIP2-201ENST00000333007 CNPP09543 421 aaKnown RBP18.08■□□□□ 0.49
TNFAIP2-201ENST00000333007 MSH3P20585 1137 aa18.08■□□□□ 0.49
TNFAIP2-201ENST00000333007 GPR15P49685 360 aa18.08■□□□□ 0.49
TNFAIP2-201ENST00000333007 NAA20P61599 178 aa18.08■□□□□ 0.49
TNFAIP2-201ENST00000333007 IKBKEQ14164 716 aa18.08■□□□□ 0.49
TNFAIP2-201ENST00000333007 ZNF423Q2M1K9 1284 aa18.08■□□□□ 0.49
TNFAIP2-201ENST00000333007 ARMC12Q5T9G4 340 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms