RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 CLASP2O75122 1294 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 CRCPO75575 148 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 ALDOCP09972 364 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 MTHFD2P13995 350 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 PAX3P23760 479 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 PIK3CGP48736 1102 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 APLP1P51693 650 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 ELAVL2Q12926 359 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 CDH18Q13634 790 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 SLC8B1Q6J4K2 584 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 SLAIN1Q8ND83 568 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 EID2BQ96D98 161 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 AARSD1Q9BTE6 412 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 ELAC1Q9H777 363 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 DNAJC15Q9Y5T4 150 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 PSMD12O00232 456 aaPredicted RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 KDELR3O43731 214 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 NPHS1O60500 1241 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 FKTNO75072 461 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 ACADSP16219 412 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 ITGB8P26012 769 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 KPNA2P52292 529 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 DSG1Q02413 1049 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 BTG3Q14201 252 aaPredicted RBP18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 VPS26BQ4G0F5 336 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 CRIPAKQ8N1N5 446 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 TUBGCP3Q96CW5 907 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 RANBP9Q96S59 729 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 DONSONQ9NYP3 566 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 VTI1BQ9UEU0 232 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 PLXNA3P51805 1871 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 CEP290O15078 2479 aa18.1■□□□□ 0.49
LYSMD4-201ENST00000332728 KRT87PA6NCN2 255 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 FBP2O00757 339 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 KATNA1O75449 491 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 ECI2O75521 394 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 IMPDH1P20839 514 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 STK19P49842 368 aaPredicted RBP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 ZNF140P52738 457 aaPredicted RBP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 PTK2BQ14289 1009 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 ZRSR2Q15696 482 aaKnown RBP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 AAK1Q2M2I8 961 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 CAPRIN2Q6IMN6 1127 aaKnown RBP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 TMEM150AQ86TG1 271 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 RP9Q8TA86 221 aaKnown RBP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 TADA1Q96BN2 335 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 KLHL32Q96NJ5 620 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 GPR63Q9BZJ6 419 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 C2orf81A6NN90 581 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 ANKRD66B4E2M5 251 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 H3BNX3 289 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 CLDN11O75508 207 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 SMNDC1O75940 238 aaKnown RBP eCLIP18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 C19orf60Q96EN9 201 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 PPP1R2P1Q96PQ5 205 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 ANKRD36A6QL64 1941 aa18.09■□□□□ 0.49
LYSMD4-201ENST00000332728 A0A1B0GVM2 712 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 TRPC5OSA6NMA1 111 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 E5RI56 91 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 RNASEH1O60930 286 aaKnown RBP18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 PAPSS2O95340 614 aaPredicted RBP18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 CRTAMO95727 393 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 GABRR2P28476 465 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 DIO3P55073 304 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 RBBP7Q16576 425 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 METTL21CQ5VZV1 264 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 IFNEQ86WN2 208 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 ATP6V1E2Q96A05 226 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 LINGO1Q96FE5 620 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 EFCAB1Q9HAE3 211 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 EML4Q9HC35 981 aaKnown RBP18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 VPS51Q9UID3 782 aa18.08■□□□□ 0.49
LYSMD4-201ENST00000332728 CTSOP43234 321 aaPredicted RBP18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 GK3PQ14409 553 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 ZNF423Q2M1K9 1284 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 CCDC117Q8IWD4 279 aaPredicted RBP18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 FBXO39Q8N4B4 442 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 TWIST2Q8WVJ9 160 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 LPGAT1Q92604 370 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 TUBGCP5Q96RT8 1024 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 TUBB1Q9H4B7 451 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 ZNF385DQ9H6B1 395 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 EIF2B4Q9UI10 523 aaKnown RBP18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 V9GYQ6 96 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 SPTBN5Q9NRC6 3674 aaKnown RBP18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 CSF2RAP15509 400 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 NELFEP18615 380 aaKnown RBP18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 PSME3P61289 254 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 HERVK_113P63132 956 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 POM121L1PQ3SYA9 428 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 REP15Q6BDI9 236 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 RFLNAQ6ZTI6 216 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 VPS33AQ96AX1 596 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 TTLL2Q9BWV7 592 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 ERVK-6Q9BXR3 956 aa18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 MRPL1Q9BYD6 325 aaKnown RBP18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 AFF4Q9UHB7 1163 aaKnown RBP18.08■□□□□ 0.48
LYSMD4-201ENST00000332728 EGFL7Q9UHF1 273 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms