RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SUPT3HB4E1H0 165 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 PIP5K1BO14986 540 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 CLASP2O75122 1294 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 SUPT3HO75486 399 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 IRF1P10914 325 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 LPOP22079 712 aaPredicted RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 CES1P23141 567 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 ACADVLP49748 655 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 ARF5P84085 180 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 ADGRF1Q5T601 910 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 RNF219Q5W0B1 726 aaPredicted RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 C8orf82Q6P1X6 216 aaPredicted RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 FBXL19Q6PCT2 694 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 TICAM1Q8IUC6 712 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 FUNDC1Q8IVP5 155 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 RNF168Q8IYW5 571 aaPredicted RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 SCLYQ96I15 445 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 BIRC8Q96P09 236 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 GCNAQ96QF7 691 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 GPR21Q99679 349 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 MRPL40Q9NQ50 206 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 SPATS2LQ9NUQ6 558 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 TRPM5Q9NZQ8 1165 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 AFF4Q9UHB7 1163 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 RNF112Q9ULX5 631 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 OAS3Q9Y6K5 1087 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 TANC1Q9C0D5 1861 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 CD160O95971 181 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 EEF1DP29692 281 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 STX1BP61266 288 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 ATP6V0D1P61421 351 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 FOLH1Q04609 750 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 CLCQ05315 142 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 RAD51Q06609 339 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 TRIM25Q14258 630 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 TSNQ15631 228 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 RARS2Q5T160 578 aaKnown RBP14.5□□□□□ -0.09
TPM3-206ENST00000330188 PSAPL1Q6NUJ1 521 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 HACD2Q6Y1H2 254 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 SPATA24Q86W54 205 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 PHYKPLQ8IUZ5 450 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 PIANPQ8IYJ0 282 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 FBXO39Q8N4B4 442 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 TRPC4APQ8TEL6 797 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 KCNA7Q96RP8 456 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 SLC30A3Q99726 388 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 PKP2Q99959 881 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 CLSTN3Q9BQT9 956 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 CFHR5Q9BXR6 569 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 MUC3BQ9H195 1237 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 TUBB1Q9H4B7 451 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 GALPQ9UBC7 116 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 GIMAP2Q9UG22 337 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 FKBPLQ9UIM3 349 aa14.5□□□□□ -0.09
TPM3-206ENST00000330188 C2orf78A6NCI8 922 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 ANKRD66B4E2M5 251 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 CDC7O00311 574 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 ECI2O75521 394 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 TMCC1O94876 653 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 C8BP07358 591 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 ALDH7A1P49419 539 aaKnown RBP14.49□□□□□ -0.09
TPM3-206ENST00000330188 TRAF2Q12933 501 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 RALGDSQ12967 914 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 GRB7Q14451 532 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 PTPRNQ16849 979 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 GEN1Q17RS7 908 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 TOP1MTQ969P6 601 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 CAPNS2Q96L46 248 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 KLF16Q9BXK1 252 aaPredicted RBP14.49□□□□□ -0.09
TPM3-206ENST00000330188 PCDHAC1Q9H158 963 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 SPAG4Q9NPE6 437 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 TMEM181Q9P2C4 612 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 CD300AQ9UGN4 299 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 CROTQ9UKG9 612 aa14.49□□□□□ -0.09
TPM3-206ENST00000330188 A0A1B0GTL3 188 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 PRORSD1PA6NEY8 169 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 TXNDC9O14530 226 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 SNAP91O60641 907 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 CAPNS1P04632 268 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 RPS17P08708 135 aaKnown RBP14.48□□□□□ -0.09
TPM3-206ENST00000330188 PKMP14618 531 aaKnown RBP14.48□□□□□ -0.09
TPM3-206ENST00000330188 MC4RP32245 332 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 LCP2Q13094 533 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 PLD1Q13393 1074 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 PTPRRQ15256 657 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 KIF19Q2TAC6 998 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 LINGO4Q6UY18 593 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 MICAL3Q7RTP6 2002 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 TTC30BQ8N4P2 665 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 NKAPQ8N5F7 415 aaKnown RBP14.48□□□□□ -0.09
TPM3-206ENST00000330188 EFHBQ8N7U6 833 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 TMEM102Q8N9M5 508 aaPredicted RBP14.48□□□□□ -0.09
TPM3-206ENST00000330188 SLAIN1Q8ND83 568 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 ADCY4Q8NFM4 1077 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 FUBP1Q96AE4 644 aaKnown RBP14.48□□□□□ -0.09
TPM3-206ENST00000330188 MYRFLQ96LU7 910 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 PLXNA4Q9HCM2 1894 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 EPS15L1Q9UBC2 864 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 NPEPPSL1A6NEC2 478 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms