RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TP53INP2Q8IXH6 220 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 DCAKDQ8WVC6 231 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 DNAJC9Q8WXX5 260 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 REPS1Q96D71 796 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 FAM120BQ96EK7 910 aaKnown RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CCDC154A6NI56 674 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 OR2AG2A6NM03 316 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ANKRD66B4E2M5 251 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 PDE5AO76074 875 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 SLC35G4P0C7Q5 338 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ERVK-21P61565 698 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 TGM3Q08188 693 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 BEND5Q7L4P6 421 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ZDHHC14Q8IZN3 488 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 C12orf76Q8N812 135 aaPredicted RBP13.63□□□□□ -0.23
DDX54-202ENST00000314045 ST13P5Q8NFI4 369 aaPredicted RBP13.63□□□□□ -0.23
DDX54-202ENST00000314045 OR14C36Q8NHC7 312 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ZSCAN18Q8TBC5 510 aaPredicted RBP13.63□□□□□ -0.23
DDX54-202ENST00000314045 MIPOL1Q8TD10 442 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 NRBF2Q96F24 287 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CDH19Q9H159 772 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ADAM7Q9H2U9 754 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 WDR55Q9H6Y2 383 aaPredicted RBP13.63□□□□□ -0.23
DDX54-202ENST00000314045 PHPT1Q9NRX4 125 aaPredicted RBP13.63□□□□□ -0.23
DDX54-202ENST00000314045 RFPL2O75678 378 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CPNE9Q8IYJ1 553 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 SLC39A11Q8N1S5 342 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 FLCNQ8NFG4 579 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CYB5D2Q8WUJ1 264 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CCDC3Q9BQI4 270 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 SLC2A6Q9UGQ3 507 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ZNF839A8K0R7 811 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ALPIP09923 528 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CTSAP10619 480 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ADH5P11766 374 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 GDI1P31150 447 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 S100A3P33764 101 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CHRNB3Q05901 458 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 PDGFRLQ15198 375 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 DPY19L2P1Q6NXN4 242 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 YTHDF3Q7Z739 585 aaKnown RBP13.63□□□□□ -0.23
DDX54-202ENST00000314045 BBS7Q8IWZ6 715 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 MFSD1Q9H3U5 465 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 ZNF358Q9NW07 568 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 VPS51Q9UID3 782 aa13.63□□□□□ -0.23
DDX54-202ENST00000314045 CACNB4O00305 520 aaPredicted RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 ZMPSTE24O75844 475 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 WDR47O94967 919 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 UGT1A6P19224 532 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 UGT1A1P22309 533 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 UGT1A4P22310 534 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ME2P23368 584 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 UGT1A3P35503 534 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 UGT1A5P35504 534 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 CCNHP51946 323 aaPredicted RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 WDR5P61964 334 aaKnown RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 CNTN1Q12860 1018 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 TCHHL1Q5QJ38 904 aaPredicted RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 ALYREFQ86V81 257 aaKnown RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 PCDH20Q8N6Y1 951 aaKnown RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 CCDC90BQ9GZT6 254 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 AASDHPPTQ9NRN7 309 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ANKDD1BA6NHY2 528 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 F7P08709 466 aaPredicted RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 ACAP2Q15057 778 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 PLEKHG6Q3KR16 790 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 FBXO48Q5FWF7 155 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 PAQR9Q6ZVX9 377 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 MTSS1LQ765P7 747 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 LYSMD3Q7Z3D4 306 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 SYT12Q8IV01 421 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ZBTB2Q8N680 514 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 PGAP3Q96FM1 320 aaPredicted RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 HERC2P3Q9BVR0 1158 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 H3BM21 787 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 TGM5O43548 720 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 GCKP35557 465 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 VHLP40337 213 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 HPCAP84074 193 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 TP53BP2Q13625 1128 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 NPWQ8N729 165 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 SKA1Q96BD8 255 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 C7orf26Q96N11 449 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 WDR6Q9NNW5 1121 aaKnown RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 SNX13Q9Y5W8 968 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 KANSL1LA0AUZ9 987 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ATG13O75143 517 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 SERPINA6P08185 405 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 IVDP26440 423 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 DSG1Q02413 1049 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 CYTH1Q15438 398 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 C2orf27AQ580R0 203 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ARSIQ5FYB1 569 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ICE2Q659A1 982 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms