RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 MBL2P11226 248 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CCNCP24863 283 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 HOXD12P35452 270 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CD86P42081 329 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ATP4BP51164 291 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 TMBIM6P55061 237 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 YBX1P67809 324 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CD300CQ08708 224 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 PPP1R8Q12972 351 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 PIWIL3Q7Z3Z3 882 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 R3HCC1LQ7Z5L2 792 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 THAP5Q7Z6K1 395 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ZDHHC13Q8IUH4 622 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SNX29P2Q8IUI4 249 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 BLOC1S5Q8TDH9 187 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 GLMNQ92990 594 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 BIRC7Q96CA5 298 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 PPM1MQ96MI6 270 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 NEURL2Q9BR09 285 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SLC39A8Q9C0K1 460 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 TXNRD2Q9NNW7 524 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 PCDH12Q9NPG4 1184 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 HPS4Q9NQG7 708 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CNGB3Q9NQW8 809 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 C8orf4Q9NR00 106 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 MPP6Q9NZW5 540 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 TSR3Q9UJK0 312 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 RNF112Q9ULX5 631 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 MAGED1Q9Y5V3 778 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 NRCAMQ92823 1304 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 MYBPHLA2RUH7 354 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ASB14A6NK59 587 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ALDH4A1P30038 563 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 POLR2IP36954 125 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 OPRL1P41146 370 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CDKN2DP55273 166 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ARHGAP1Q07960 439 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SNX17Q15036 470 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 DALRD3Q5D0E6 543 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SPRED1Q7Z699 444 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 COLGALT2Q8IYK4 626 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 FBXO30Q8TB52 745 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ADAMTS16Q8TE57 1224 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 PTCD2Q8WV60 388 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 FIG4Q92562 907 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SLC30A3Q99726 388 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 HEPHQ9BQS7 1158 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CATSPERBQ9H7T0 1116 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 GIN1Q9NXP7 522 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 POLG2Q9UHN1 485 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 HTR3EA5X5Y0 456 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 CACNB2Q08289 660 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SCAPQ12770 1279 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SEMA3BQ13214 749 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF846Q147U1 533 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ZBTB6Q15916 424 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 GPR162Q16538 588 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 DENND5AQ6IQ26 1287 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 TFAP2DQ7Z6R9 452 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SLCO6A1Q86UG4 719 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 ZCCHC7Q8N3Z6 543 aaKnown RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 FBXO39Q8N4B4 442 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 FNDC5Q8NAU1 212 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 TRPM4Q8TD43 1214 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 YIPF2Q9BWQ6 316 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 TRIM54Q9BYV2 358 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SLC27A5Q9Y2P5 690 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 GPC6Q9Y625 555 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SLC30A1Q9Y6M5 507 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 TTC24A2A3L6 582 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 KRBA1A5PL33 1030 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 FXYD1O00168 92 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ACOX3O15254 700 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 DYNC1LI2O43237 492 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 NOBOXO60393 691 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 XYLBO75191 536 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ARSFP54793 590 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PGS1Q32NB8 556 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 FAM98BQ52LJ0 330 aaKnown RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 TBPL2Q6SJ96 375 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ISCA2Q86U28 154 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 KCTD13Q8WZ19 329 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 NCLNQ969V3 563 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 TMBIM1Q969X1 311 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PCED1BQ96HM7 432 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 KLHL5Q96PQ7 755 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 TUBA1CQ9BQE3 449 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 YTHDF1Q9BYJ9 559 aaKnown RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 RMI1Q9H9A7 625 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PALMDQ9NP74 551 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 LEF1Q9UJU2 399 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 FAM50BQ9Y247 325 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 CEP350Q5VT06 3117 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 MATN3O15232 486 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms