RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 PNPLA3Q9NST1 481 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CCM2LQ9NUG4 571 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ACTR3BQ9P1U1 418 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 RNF112Q9ULX5 631 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TANC1Q9C0D5 1861 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 MTMR11A4FU01 709 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 IFRD1O00458 451 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ACSL4O60488 711 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 VPS26AO75436 327 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 NDUFS3O75489 264 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PRR35P0CG20 571 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 MTHFD2P13995 350 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CD1EP15812 388 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 HOXD9P28356 352 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SLC7A2P52569 658 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 OXCT1P55809 520 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SH3BP2P78314 561 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TIAL1Q01085 375 aaKnown RBP eCLIP9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SP3Q02447 781 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CLCQ05315 142 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 IKBKEQ14164 716 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 IHHQ14623 411 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 OR4D1Q15615 310 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PPP1R3AQ16821 1122 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 AASDHQ4L235 1098 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PPP4R4Q6NUP7 873 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 UGT3A1Q6NUS8 523 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ANKS3Q6ZW76 656 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PIM3Q86V86 326 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 MIB1Q86YT6 1006 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PHYKPLQ8IUZ5 450 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 HERC6Q8IVU3 1022 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 STK40Q8N2I9 435 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 MFSD2AQ8NA29 543 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 OR52K2Q8NGK3 314 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ATP6V1E2Q96A05 226 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TMEM175Q9BSA9 504 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ANKRD60Q9BZ19 345 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 RIC8BQ9NVN3 520 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 UBAP1Q9NZ09 502 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CRYL1Q9Y2S2 319 aa9.97□□□□□ -0.81
TNFRSF11B-201ENST00000297350 F8W810 466 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PDLIM1O00151 329 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TBC1D4O60343 1298 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 B4GALT3O60512 393 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TLR5O60602 858 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CLASP2O75122 1294 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CRCPO75575 148 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 GNRH1P01148 92 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SLC4A1P02730 911 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ALDOCP09972 364 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 UROSP10746 265 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 UMPSP11172 480 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 IL10P22301 178 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PSMA4P25789 261 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 GRIA2P42262 883 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 KCNC1P48547 511 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 GPR15P49685 360 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 MYBPC1Q00872 1141 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 RPS6KA2Q15349 733 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 GEN1Q17RS7 908 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PDCD4Q53EL6 469 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CLEC6AQ6EIG7 209 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 B3GNT6Q6ZMB0 384 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 EP400NLQ6ZTU2 488 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CARM1Q86X55 608 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CAMK1DQ8IU85 385 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 GALNT13Q8IUC8 556 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 FUNDC1Q8IVP5 155 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ABI1Q8IZP0 508 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 LGI2Q8N0V4 545 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 RNF148Q8N7C7 305 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TNIP2Q8NFZ5 429 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CNBD2Q96M20 576 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 MRPL9Q9BYD2 267 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 BRINP2Q9C0B6 783 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CWH43Q9H720 699 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TRMT13Q9NUP7 481 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TUBA8Q9NY65 449 aaPredicted RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SRRDQ9UH36 339 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PTBP2Q9UKA9 531 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PACSIN3Q9UKS6 424 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CNOT6Q9ULM6 557 aaKnown RBP9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ARL5AQ9Y689 179 aa9.96□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SUPT3HB4E1H0 165 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 H7C0S8 307 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 UBXN8O00124 270 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 NR5A2O00482 541 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 GIPC1O14908 333 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 PIP5K1BO14986 540 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 INSIG1O15503 277 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 SUPT3HO75486 399 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 ESRRBO95718 433 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 TFAP2AP05549 437 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 CR2P20023 1033 aa9.96□□□□□ -0.82
TNFRSF11B-201ENST00000297350 LPOP22079 712 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms