RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GBP5Q96PP8 586 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 VCXQ9H320 206 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 STN1Q9H668 368 aaKnown RBP9.27□□□□□ -0.92
PRDM9-201ENST00000296682 F5P12259 2224 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 TMEM114B3SHH9 223 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 H3BMM5 538 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 MRASO14807 208 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 SLC7A4O43246 635 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 CLASP2O75122 1294 aaKnown RBP9.27□□□□□ -0.93
PRDM9-201ENST00000296682 CXCL14O95715 111 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 S100BP04271 92 aaPredicted RBP9.27□□□□□ -0.93
PRDM9-201ENST00000296682 PYGLP06737 847 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 HTR7P34969 479 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 DDX39BQ13838 428 aaKnown RBP9.27□□□□□ -0.93
PRDM9-201ENST00000296682 PLPP4Q5VZY2 271 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 LRRC49Q8IUZ0 686 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 VPS33AQ96AX1 596 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 CLPBQ9H078 707 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 ZDHHC6Q9H6R6 413 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 C5orf42Q9H799 3197 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 A0A1B0GVM2 712 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 TCAF2A6NFQ2 919 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 ANKRD66B4E2M5 251 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 F8W8V4 182 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 PIP5K1BO14986 540 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 AKAP10O43572 662 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 LUC7L3O95232 432 aaKnown RBP9.27□□□□□ -0.93
PRDM9-201ENST00000296682 CHEK2O96017 543 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 MMP2P08253 660 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 ATXN8OSP0DMR3 200 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 PSMC3P17980 439 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 AOC1P19801 751 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 KPNA1P52294 538 aaPredicted RBP9.27□□□□□ -0.93
PRDM9-201ENST00000296682 BCL2L1Q07817 233 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 TUBB3Q13509 450 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 OR4D1Q15615 310 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 TBCCQ15814 346 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 MANEALQ5VSG8 457 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 FAM45BPQ6NSW5 357 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 C16orf89Q6UX73 402 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.27□□□□□ -0.93
PRDM9-201ENST00000296682 LSMEM2Q8N112 164 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 MDGA1Q8NFP4 955 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 FAM45AQ8TCE6 357 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.27□□□□□ -0.93
PRDM9-201ENST00000296682 EME1Q96AY2 570 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 ULK4Q96C45 1275 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 MTG2Q9H4K7 406 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 TREX1Q9NSU2 369 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 EPS15L1Q9UBC2 864 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 APPL1Q9UKG1 709 aa9.27□□□□□ -0.93
PRDM9-201ENST00000296682 CLDN7O95471 211 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CST5P28325 142 aaPredicted RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 PRDX3P30048 256 aaKnown RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CDH4P55283 916 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ACTR3P61158 418 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 DSG1Q02413 1049 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 SULT2A1Q06520 285 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 BOP1Q14137 746 aaKnown RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ANKS6Q68DC2 871 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 NET1Q7Z628 596 aaPredicted RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CLEC14AQ86T13 490 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ISCA2Q86U28 154 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 GPSM1Q86YR5 675 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 FBXW8Q8N3Y1 598 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 METTL6Q8TCB7 284 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 WFDC5Q8TCV5 224 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 NUDT8Q8WV74 236 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 PPP1R2P1Q96PQ5 205 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF184Q99676 751 aaPredicted RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 MAGEH1Q9H213 219 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 C1orf21Q9H246 121 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 IGSF5Q9NSI5 407 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 STX18Q9P2W9 335 aaKnown RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 EIF2B4Q9UI10 523 aaKnown RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 NEDD8-MDP1E9PL57 170 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 PER2O15055 1255 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 TEX28O15482 410 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 RFPL2O75678 378 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CNPP09543 421 aaKnown RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 MAGEA11P43364 429 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 RECQLP46063 649 aaPredicted RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 IL2P60568 153 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 PSME3P61289 254 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 FAM189BP81408 668 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 TRAF2Q12933 501 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF549Q6P9A3 640 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 BBS7Q8IWZ6 715 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 KDM1BQ8NB78 822 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 STAG3L4Q8TBR4 150 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 SORCS1Q8WY21 1168 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CCDC97Q96F63 343 aaPredicted RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 C1QTNF1Q9BXJ1 281 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 SYTL2Q9HCH5 934 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ZFP14Q9HCL3 533 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 PLXNA4Q9HCM2 1894 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 HCFC1R1Q9NWW0 138 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CCDC189A1A4V9 331 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms