RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ECI2O75521 394 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 MBL2P11226 248 aaPredicted RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 ITGB6P18564 788 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 CES1P23141 567 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 KPNA2P52292 529 aaKnown RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 HK3P52790 923 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 SMAD3P84022 425 aaKnown RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 TAF12Q16514 161 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 CMPK2Q5EBM0 449 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 CTSL3PQ5NE16 218 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ADGRF1Q5T601 910 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 REP15Q6BDI9 236 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ALG1LQ6GMV1 187 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 C16orf89Q6UX73 402 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 LARP4Q71RC2 724 aaKnown RBP eCLIP11.73□□□□□ -0.53
RHO-201ENST00000296271 DDIASQ8IXT1 998 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 APCDD1Q8J025 514 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 PGAM4Q8N0Y7 254 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 LRRC43Q8N309 656 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 EEF1AKMT1Q8WVE0 214 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 C19orf60Q96EN9 201 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 RPL10LQ96L21 214 aaKnown RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 CDK15Q96Q40 435 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ACOX2Q99424 681 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 SMG9Q9H0W8 520 aaKnown RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 EFCAB1Q9HAE3 211 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 CACNA2D2Q9NY47 1150 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 TRPM5Q9NZQ8 1165 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ZNF225Q9UK10 706 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 PRORSD1PA6NEY8 169 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ANKRD66B4E2M5 251 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 EFEMP2O95967 443 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 DNAJB1P25685 340 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 PSME3P61289 254 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 CYP4F8P98187 520 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 PTK2BQ14289 1009 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 TYSND1Q2T9J0 566 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 OR52E8Q6IFG1 317 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 IRGCQ6NXR0 463 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 DNAJB7Q7Z6W7 309 aaPredicted RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 CAMK1DQ8IU85 385 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 GPR150Q8NGU9 434 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ZNF461Q8TAF7 563 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 PKP2Q99959 881 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 ABCG8Q9H221 673 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 DONSONQ9NYP3 566 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 CORO1CQ9ULV4 474 aaPredicted RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 SUFUQ9UMX1 484 aa11.73□□□□□ -0.53
RHO-201ENST00000296271 XIRP2A4UGR9 3374 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 MYOCOSA0A1B0GUC4 107 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 H0Y626 953 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 BTN3A1O00481 513 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 TXNDC9O14530 226 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 ACOT8O14734 319 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 NDUFS3O75489 264 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 CLDN11O75508 207 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 EPOP01588 193 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 CA8P35219 290 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 PEX19P40855 299 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 DIO3P55073 304 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 DEFB103AP81534 67 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 TLE2Q04725 743 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 ELAVL2Q12926 359 aaKnown RBP11.72□□□□□ -0.53
RHO-201ENST00000296271 LRP8Q14114 963 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 MMEL1Q495T6 779 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 TRIM60Q495X7 471 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 SPATA24Q86W54 205 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 CPNE9Q8IYJ1 553 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 MYLIPQ8WY64 445 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 ATP6V1E2Q96A05 226 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 L3HYPDHQ96EM0 354 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 TEX37Q96LM6 180 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 SEMA6AQ9H2E6 1030 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 EML4Q9HC35 981 aaKnown RBP11.72□□□□□ -0.53
RHO-201ENST00000296271 VPS28Q9UK41 221 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 RNF112Q9ULX5 631 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 PRRG1O14668 218 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 SMIM24O75264 130 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 LYNP07948 512 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 CSKP41240 450 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 TUFMP49411 452 aaKnown RBP11.72□□□□□ -0.53
RHO-201ENST00000296271 CAPRIN1Q14444 709 aaKnown RBP11.72□□□□□ -0.53
RHO-201ENST00000296271 AAK1Q2M2I8 961 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 TAS2R42Q7RTR8 314 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 LYSMD3Q7Z3D4 306 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 SLC22A9Q8IVM8 553 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
RHO-201ENST00000296271 TWIST2Q8WVJ9 160 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 FUBP1Q96AE4 644 aaKnown RBP11.72□□□□□ -0.53
RHO-201ENST00000296271 TMEM175Q9BSA9 504 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 BOCQ9BWV1 1114 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 MRPL9Q9BYD2 267 aaKnown RBP11.72□□□□□ -0.53
RHO-201ENST00000296271 KLHL4Q9C0H6 718 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 LHX3Q9UBR4 397 aa11.72□□□□□ -0.53
RHO-201ENST00000296271 MICAL3Q7RTP6 2002 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms