RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ZFYVE1Q9HBF4 777 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 COMMD8Q9NX08 183 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CNTN3Q9P232 1028 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 VPS9D1Q9Y2B5 631 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CFAP20Q9Y6A4 193 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 LOC100506127A0A0U1RQW1 187 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 PRAMEF1O95521 474 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 LDLRP01130 860 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CHRNA1P02708 482 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ATP6V1C1P21283 382 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ITIH5Q86UX2 942 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 TRIM48Q8IWZ4 208 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 UPF1Q92900 1129 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBR1-201ENST00000290650 PANX3Q96QZ0 392 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 NFKBIZQ9BYH8 718 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 USP29Q9HBJ7 922 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 FBRSL1Q9HCM7 1045 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 RAD18Q9NS91 495 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ZNF490Q9ULM2 529 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 TRAV19A0A0A6YYK7 116 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PER2O15055 1255 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 KDM1AO60341 852 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 OR56A5P0C7T3 313 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 IVDP26440 423 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 S100A3P33764 101 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 IDH2P48735 452 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 GNA12Q03113 381 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 MAPKAPK3Q16644 382 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 FAM98BQ52LJ0 330 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 ZNF648Q5T619 568 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 GPR107Q5VW38 600 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ANO7Q6IWH7 933 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ZYG11AQ6WRX3 759 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 C10orf71Q711Q0 1435 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PIWIL4Q7Z3Z4 852 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 TREML1Q86YW5 311 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 OR10T2Q8NGX3 314 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CLIP3Q96DZ5 547 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CAPNS2Q96L46 248 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 POLG2Q9UHN1 485 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PRKAB1Q9Y478 270 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CPQQ9Y646 472 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 A0A0G2JN53 185 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SLC38A8A6NNN8 435 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 NOBOXO60393 691 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 TPST2O60704 377 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 TM7SF2O76062 418 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 GBAP04062 536 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PTNP21246 168 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 KPNA1P52294 538 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 SEC13P55735 322 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 GRB14Q14449 540 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SQLEQ14534 574 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PCLAFQ15004 111 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SAMD4BQ5PRF9 694 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 AFTPHQ6ULP2 937 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 USP45Q70EL2 814 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 OR52J3Q8NH60 311 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 OR52E6Q96RD3 313 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SLC25A23Q9BV35 468 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 C2orf49Q9BVC5 232 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 TXLNGYQ9BZA5 131 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ASAH2Q9NR71 780 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 DDX28Q9NUL7 540 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 ABCB8Q9NUT2 735 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SLC7A8Q9UHI5 535 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 DYRK1BQ9Y463 629 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 DGKBQ9Y6T7 804 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 HOXA2O43364 376 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 OR1I1O60431 355 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 FAM20BO75063 409 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 KCNH1O95259 989 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 GJB5O95377 273 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CSKP41240 450 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 POLD2P49005 469 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CHN2P52757 468 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ACLYP53396 1101 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 IRF8Q02556 426 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 INSCQ1MX18 579 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 PRR23CQ6ZRP0 262 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 KBTBD2Q8IY47 623 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 FAM47BQ8NA70 645 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 NSUN5Q96P11 429 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 PDLIM7Q9NR12 457 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 RASSF1Q9NS23 344 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 EFR3BQ9Y2G0 817 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 STYXL1Q9Y6J8 313 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 USP54Q70EL1 1684 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ZBTB42B2RXF5 422 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 HNRNPCL2B2RXH8 293 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ADCY6O43306 1168 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 RPP40O75818 363 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 CLIC3O95833 236 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 HAPLN1P10915 354 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 MYCLP1P12525 358 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 XRCC1P18887 633 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 ALDH4A1P30038 563 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TTPAP49638 278 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 NEK2P51955 445 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms