RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 LINGO1Q96FE5 620 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 KLHL32Q96NJ5 620 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 MUS81Q96NY9 551 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 CHCHD6Q9BRQ6 235 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.66■□□□□ 0.1
USP43-201ENST00000285199 hCG_2039718K7EN88 272 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 JUNP05412 331 aaKnown RBP15.66■□□□□ 0.1
USP43-201ENST00000285199 PBLDP30039 288 aaPredicted RBP15.66■□□□□ 0.1
USP43-201ENST00000285199 SLC5A2P31639 672 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 GJA8P48165 433 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 ZNF177Q13360 481 aaPredicted RBP15.66■□□□□ 0.1
USP43-201ENST00000285199 LGI2Q8N0V4 545 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 PSD4Q8NDX1 1056 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 SETD9Q8NE22 299 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 FNDC8Q8TC99 324 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 PDGFDQ9GZP0 370 aaPredicted RBP15.66■□□□□ 0.1
USP43-201ENST00000285199 RMND5AQ9H871 391 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 CROCCQ5TZA2 2017 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 AKAP11Q9UKA4 1901 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 FAM72CH0Y354 149 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 SOCS2O14508 198 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 SNX17Q15036 470 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 FAM72AQ5TYM5 149 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 FAM72DQ6L9T8 149 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 FAM72BQ86X60 149 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 AMER2Q8N7J2 671 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 GPR21Q99679 349 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 ATP13A1Q9HD20 1204 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 MAP10Q9P2G4 905 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 KCTD3Q9Y597 815 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 MYO9BQ13459 2157 aa15.66■□□□□ 0.1
USP43-201ENST00000285199 COL6A1P12109 1028 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 PTPN9P43378 593 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 CLCQ05315 142 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 FAM45BPQ6NSW5 357 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 CARNMT1Q8N4J0 409 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 SVOPQ8N4V2 548 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 LZTR1Q8N653 840 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 OR4K2Q8NGD2 314 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 GIN1Q9NXP7 522 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.65■□□□□ 0.1
USP43-201ENST00000285199 VPS28Q9UK41 221 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 PHF24Q9UPV7 400 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 FBP2O00757 339 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 ENPP3O14638 875 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 TLR5O60602 858 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 NBNO60934 754 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 SNNO75324 88 aaPredicted RBP15.65■□□□□ 0.1
USP43-201ENST00000285199 ULK1O75385 1050 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 ARIH2O95376 493 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 CAPN1P07384 714 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 POU2F1P14859 743 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 CTPS1P17812 591 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 GSK3BP49841 420 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 PDZK1Q5T2W1 519 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 OGFRL1Q5TC84 451 aaPredicted RBP15.65■□□□□ 0.1
USP43-201ENST00000285199 ACVR1CQ8NER5 493 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 SLC47A1Q96FL8 570 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 NIFKQ9BYG3 293 aaKnown RBP15.65■□□□□ 0.1
USP43-201ENST00000285199 HIPK3Q9H422 1215 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 SYNPO2Q9UMS6 1093 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 RGPD5Q99666 1765 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 KIF1AQ12756 1690 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 MGAT4DA6NG13 374 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 XYLBO75191 536 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 IST1P53990 364 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 ANKDD1AQ495B1 522 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 C15orf39Q6ZRI6 1047 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 NCCRP1Q6ZVX7 275 aaPredicted RBP15.65■□□□□ 0.1
USP43-201ENST00000285199 DET1Q7L5Y6 550 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 RASAL3Q86YV0 1011 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 MYLPFQ96A32 169 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 AGO3Q9H9G7 860 aaKnown RBP15.65■□□□□ 0.1
USP43-201ENST00000285199 PNPLA8Q9NP80 782 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 OPTCQ9UBM4 332 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 FZD10Q9ULW2 581 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 ROBO1Q9Y6N7 1651 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 PPIL2Q13356 520 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 RAB39AQ14964 217 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 PSMD5Q16401 504 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 CYP2A13Q16696 494 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 COLEC12Q5KU26 742 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 GLB1LQ6UWU2 654 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 ZNF605Q86T29 641 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 CLIP4Q8N3C7 705 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 SCAMP5Q8TAC9 235 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 FAM45AQ8TCE6 357 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 MED8Q96G25 268 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 ABCB9Q9NP78 766 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 SMOXQ9NWM0 555 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 EIF2B4Q9UI10 523 aaKnown RBP15.65■□□□□ 0.1
USP43-201ENST00000285199 SATB2Q9UPW6 733 aa15.65■□□□□ 0.1
USP43-201ENST00000285199 PIPSLA2A3N6 862 aa15.64■□□□□ 0.09
USP43-201ENST00000285199 XPNPEP2O43895 674 aa15.64■□□□□ 0.09
USP43-201ENST00000285199 POLD2P49005 469 aa15.64■□□□□ 0.09
USP43-201ENST00000285199 OAZ1P54368 228 aa15.64■□□□□ 0.09
USP43-201ENST00000285199 DQX1Q8TE96 717 aaKnown RBP15.64■□□□□ 0.09
USP43-201ENST00000285199 PPP1R2P1Q96PQ5 205 aa15.64■□□□□ 0.09
USP43-201ENST00000285199 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
USP43-201ENST00000285199 SACM1LQ9NTJ5 587 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms