RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CACNB2Q08289 660 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ZBTB6Q15916 424 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF484Q5JVG2 852 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 NIPAL1Q6NVV3 410 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 CRTC3Q6UUV7 619 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ARMCX2Q7L311 632 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 RAVER1Q8IY67 606 aaKnown RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 OR10Q1Q8NGQ4 319 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ADAMTS16Q8TE57 1224 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 FEM1CQ96JP0 617 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 SLC39A8Q9C0K1 460 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF701M0R085 212 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-202ENST00000273342 AZIN1O14977 448 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 MTSS1O43312 755 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 GJB3O75712 270 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 HLCSP50747 726 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 WNT3AP56704 352 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 IL1RL1Q01638 556 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 SPRED1Q7Z699 444 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 TFAP2DQ7Z6R9 452 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 DSG4Q86SJ6 1040 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 SAPCD2Q86UD0 394 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 SFRP1Q8N474 314 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 PACRGLQ8N7B6 248 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 DOK1Q99704 481 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 HNRNPABQ99729 332 aaKnown RBP12.87□□□□□ -0.35
COL8A1-202ENST00000273342 HOPXQ9BPY8 73 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-202ENST00000273342 POLG2Q9UHN1 485 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 UBQLN1Q9UMX0 589 aaKnown RBP12.87□□□□□ -0.35
COL8A1-202ENST00000273342 U3KQV3 271 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 CNTN5O94779 1100 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 SLC26A2P50443 739 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 CCNA1P78396 465 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 YWHAHQ04917 246 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-202ENST00000273342 GRIK4Q16099 956 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 TAC4Q86UU9 113 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 KIAA2013Q8IYS2 634 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 ARL10Q8N8L6 244 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 TMBIM1Q969X1 311 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 TMEM125Q96AQ2 219 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 MRGPRX2Q96LB1 330 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 SMOQ99835 787 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 FUNDC2Q9BWH2 189 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 CRTAC1Q9NQ79 661 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 RGS18Q9NS28 235 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 RIC8BQ9NVN3 520 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 UTS2RQ9UKP6 389 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 PSME2Q9UL46 239 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 FAM50BQ9Y247 325 aa12.87□□□□□ -0.35
COL8A1-202ENST00000273342 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 INMTO95050 263 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 OXSR1O95747 527 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 MBL2P11226 248 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 TTKP33981 857 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 KCNK10P57789 538 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ARHGAP1Q07960 439 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 DGCR6Q14129 220 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 BROXQ5VW32 411 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 XAF1Q6GPH4 301 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 SLC2A7Q6PXP3 512 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 FAM86B1Q8N7N1 296 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 FBXO30Q8TB52 745 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CCDC126Q96EE4 140 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 SLC2A13Q96QE2 648 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 PIRO00625 290 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ENPP3O14638 875 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 TSPAN3O60637 253 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 BCAS1O75363 584 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ANXA9O76027 345 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ACADVLP49748 655 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 NKX2-5P52952 324 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ACAP2Q15057 778 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 OR4D1Q15615 310 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CCDC92Q53HC0 331 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 PAGE2BQ5JRK9 111 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CNTN4Q8IWV2 1026 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CADM3Q8N126 398 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ARRDC4Q8NCT1 418 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ZFP90Q8TF47 636 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 TRUB1Q8WWH5 349 aaKnown RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 PCED1BQ96HM7 432 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 VAT1Q99536 393 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 GNPTGQ9UJJ9 305 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 PCDHGA8Q9Y5G5 932 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CPQQ9Y646 472 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 OAS3Q9Y6K5 1087 aaKnown RBP12.86□□□□□ -0.35
COL8A1-202ENST00000273342 SUPT3HB4E1H0 165 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 H0Y858 1186 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ESRRBO95718 433 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms