RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 LHX5Q9H2C1 402 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 TMCC3Q9ULS5 477 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 TEX264Q9Y6I9 313 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 A0A088AWK7 358 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 IPO13O94829 963 aaKnown RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 OAS1P00973 400 aaKnown RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 ZNF182P17025 639 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 HDCP19113 662 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 MTHFRP42898 656 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 TBX4P57082 545 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 UGT3A1Q6NUS8 523 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 C19orf60Q96EN9 201 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 CENPNQ96H22 339 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 REXO5Q96IC2 774 aaKnown RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 PRICKLE1Q96MT3 831 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 LPIN3Q9BQK8 851 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 CENPOQ9BU64 300 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 SOX17Q9H6I2 414 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-201ENST00000269571 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 HMGXB4Q9UGU5 601 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 PCDHGA10Q9Y5H3 936 aa12.07□□□□□ -0.48
ERBB2-201ENST00000269571 BTBD19C9JJ37 291 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 NOBOXO60393 691 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 LRATO95237 230 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 CES1P23141 567 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 RABGGTBP53611 331 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 PTPRNQ16849 979 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 AP5B1Q2VPB7 878 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 HSDL1Q3SXM5 330 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 AARS2Q5JTZ9 985 aaKnown RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 UBE2J2Q8N2K1 259 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 RHOBTB2Q9BYZ6 727 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 SP140LQ9H930 580 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 SNX10Q9Y5X0 201 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 COL1A1P02452 1464 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 MGAT4DA6NG13 374 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 ONECUT3O60422 494 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 ANXA6P08133 673 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 MATKP42679 507 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 MERTKQ12866 999 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 TRAP1Q12931 704 aaKnown RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 NCF4Q15080 339 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 NT5DC4Q86YG4 428 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 RDH11Q8TC12 318 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 IRGQQ8WZA9 623 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 ISOC1Q96CN7 298 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 BORCS6Q96GS4 357 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 EXOC2Q96KP1 924 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 USP29Q9HBJ7 922 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 AMBNQ9NP70 447 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 DTLQ9NZJ0 730 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 TRPM5Q9NZQ8 1165 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 MPP6Q9NZW5 540 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 FETUBQ9UGM5 382 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 ADGRE2Q9UHX3 823 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 SAMHD1Q9Y3Z3 626 aaKnown RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 CENPBD1B2RD01 187 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 NFKBIEO00221 500 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 SLC22A3O75751 556 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 THRBP10828 461 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 PABPC1P11940 636 aaKnown RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 ITGALP20701 1170 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 TRIP4Q15650 581 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 CYP2A13Q16696 494 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 FGD3Q5JSP0 725 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 SLC22A16Q86VW1 577 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 RAB43Q86YS6 212 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 OR8H1Q8NGG4 311 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 SMARCD1Q96GM5 515 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 NEK6Q9HC98 313 aa12.06□□□□□ -0.48
ERBB2-201ENST00000269571 CNOT6Q9ULM6 557 aaKnown RBP12.06□□□□□ -0.48
ERBB2-201ENST00000269571 C2CD4BA6NLJ0 364 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 SCNN1GP51170 649 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 WNT3AP56704 352 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 ILF2Q12905 390 aaKnown RBP12.05□□□□□ -0.48
ERBB2-201ENST00000269571 PPIL2Q13356 520 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 ZYG11AQ6WRX3 759 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 ARMC8Q8IUR7 673 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 CLEC4CQ8WTT0 213 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 DDX1Q92499 740 aaKnown RBP12.05□□□□□ -0.48
ERBB2-201ENST00000269571 EMILIN2Q9BXX0 1053 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 TRIM45Q9H8W5 580 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-201ENST00000269571 ATP13A1Q9HD20 1204 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 BPIFA1Q9NP55 256 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 ARHGEF4Q9NR80 690 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 EXD2Q9NVH0 621 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 CLCA2Q9UQC9 943 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 TNFSF13BQ9Y275 285 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 CNPP09543 421 aaKnown RBP12.05□□□□□ -0.48
ERBB2-201ENST00000269571 PTPN1P18031 435 aaKnown RBP12.05□□□□□ -0.48
ERBB2-201ENST00000269571 AQP1P29972 269 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 PBLDP30039 288 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-201ENST00000269571 SRP54P61011 504 aaKnown RBP12.05□□□□□ -0.48
ERBB2-201ENST00000269571 FAM171A1Q5VUB5 890 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 GALNT12Q8IXK2 581 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 MARVELD2Q8N4S9 558 aa12.05□□□□□ -0.48
ERBB2-201ENST00000269571 GOLM1Q8NBJ4 401 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms