RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 FBXW8Q8N3Y1 598 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 CPA6Q8N4T0 437 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 SLC5A5Q92911 643 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 SPATC1LQ9H0A9 340 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 C11orf16Q9NQ32 467 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 EURLQ9NYK6 297 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 EGFL7Q9UHF1 273 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 RAPGEFL1Q9UHV5 662 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 ADGRE2Q9UHX3 823 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 PLCL2Q9UPR0 1127 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 KCNE2Q9Y6J6 123 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 PAX7P23759 505 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 CAP2P40123 477 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 GIT2Q14161 759 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 FAM153CQ494X1 144 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 PSTKQ8IV42 348 aaKnown RBP11.35□□□□□ -0.59
PTPN4-201ENST00000263708 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 SOCS4Q8WXH5 440 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 DIRAS2Q96HU8 199 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 MFHAS1Q9Y4C4 1052 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 CLCN7P51798 805 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 E2F2Q14209 437 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 NPNTQ6UXI9 565 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 HFE2Q6ZVN8 426 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 PRSS58Q8IYP2 241 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 SLC43A3Q8NBI5 491 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 OR6K2Q8NGY2 324 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 CPT1CQ8TCG5 803 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 KXD1Q9BQD3 176 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 WDR12Q9GZL7 423 aaKnown RBP11.35□□□□□ -0.59
PTPN4-201ENST00000263708 TTYH1Q9H313 450 aaPredicted RBP11.35□□□□□ -0.59
PTPN4-201ENST00000263708 TOR3AQ9H497 397 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 ETNK2Q9NVF9 386 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 ZNF609O15014 1411 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 ASTN2O75129 1339 aaPredicted RBP11.35□□□□□ -0.59
PTPN4-201ENST00000263708 DNASE1L3Q13609 305 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 SEMA4AQ9H3S1 761 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 CLDN4O14493 209 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 KDM4BO94953 1096 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 ITPKAP23677 461 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 DRG2P55039 364 aaKnown RBP11.35□□□□□ -0.59
PTPN4-201ENST00000263708 SLC20A2Q08357 652 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 SLC13A2Q13183 592 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 PRAMEF17Q5VTA0 474 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 FOXRED2Q8IWF2 684 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 MAB21L3Q8N8X9 362 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 ZYG11BQ9C0D3 744 aa11.35□□□□□ -0.59
PTPN4-201ENST00000263708 PRAMEF33A0A0G2JMD5 474 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 PRAMEF10O60809 474 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 APODP05090 189 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 LAMP2P13473 410 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 AKR1A1P14550 325 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 CCKBRP32239 447 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 CASRP41180 1078 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 TEAD4Q15561 434 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 RSL24D1Q9UHA3 163 aaKnown RBP11.34□□□□□ -0.59
PTPN4-201ENST00000263708 E5RJQ4 531 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 CHKAP35790 457 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 PSME3P61289 254 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 NRG1Q02297 640 aaPredicted RBP11.34□□□□□ -0.59
PTPN4-201ENST00000263708 UBAP2Q5T6F2 1119 aaKnown RBP11.34□□□□□ -0.59
PTPN4-201ENST00000263708 PRR23BQ6ZRT6 265 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 TXNRD3Q86VQ6 643 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 NXPE2Q96DL1 559 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 ADGRL3Q9HAR2 1447 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 PDK3Q15120 406 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 GPR180Q86V85 440 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 PACSIN3Q9UKS6 424 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 RNASEH2AO75792 299 aaKnown RBP11.34□□□□□ -0.59
PTPN4-201ENST00000263708 PSMG1O95456 288 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 TFEBP19484 476 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 TOR1AIP1Q5JTV8 583 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 HELQQ8TDG4 1101 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 GPR152Q8TDT2 470 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 MBOAT7Q96N66 472 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 FBXO9Q9UK97 447 aaPredicted RBP11.34□□□□□ -0.59
PTPN4-201ENST00000263708 METTL21EPA6NDL7 271 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 AP5Z1O43299 807 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 RECQL4O94761 1208 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 ADH1AP07327 375 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 MSX1P28360 303 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 HSD11B1P28845 292 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 CXCR3P49682 368 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 DUPD1Q68J44 220 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 FIP1L1Q6UN15 594 aaKnown RBP11.34□□□□□ -0.59
PTPN4-201ENST00000263708 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 OR10H4Q8NGA5 316 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 CCDC120Q96HB5 630 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 GAD1Q99259 594 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 MAPK8P45983 427 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 OR3A3P47888 321 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 OR3A2P47893 321 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 CERCAMQ5T4B2 595 aa11.34□□□□□ -0.59
PTPN4-201ENST00000263708 HJURPQ8NCD3 748 aaPredicted RBP11.34□□□□□ -0.59
PTPN4-201ENST00000263708 OR14C36Q8NHC7 312 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms