RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SERPINA4P29622 427 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 WNT3AP56704 352 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 FBXL19Q6PCT2 694 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 STK40Q8N2I9 435 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 MEIOBQ8N635 442 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 ZYG11BQ9C0D3 744 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 LIN28AQ9H9Z2 209 aaKnown RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 TBC1D24Q9ULP9 559 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 PPP2R3BQ9Y5P8 575 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 GNA12Q03113 381 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 CXCL9Q07325 125 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 SMARCB1Q12824 385 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 SLC9B1Q4ZJI4 515 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 CXXC5Q7LFL8 322 aaKnown RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 OR8H3Q8N146 312 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 C4orf32Q8N8J7 132 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 TCF25Q9BQ70 676 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 SMPD3Q9NY59 655 aaPredicted RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 ZNF232Q9UNY5 417 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 CPSF4LA6NMK7 179 aaKnown RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 TBX1O43435 398 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 MTA2O94776 668 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 PGLSO95336 258 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 CST3P01034 146 aaPredicted RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 CYP3A4P08684 503 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 TTPAP49638 278 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 PCDH1Q08174 1060 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 XYLT1Q86Y38 959 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 STARD7Q9NQZ5 370 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 GPSM3Q9Y4H4 160 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.02□□□□□ -0.48
SMG6-201ENST00000263073 FGF10O15520 208 aaPredicted RBP12.02□□□□□ -0.48
SMG6-201ENST00000263073 PTGIRP43119 386 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 ECT2LQ008S8 904 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 PIK3R6Q5UE93 754 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.48
SMG6-201ENST00000263073 PARGQ86W56 976 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 RDH11Q8TC12 318 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 OSER1Q9NX31 292 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 CCDC59Q9P031 241 aaKnown RBP12.02□□□□□ -0.48
SMG6-201ENST00000263073 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 DHRS7Q9Y394 339 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 ITGA2P17301 1181 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 XIAPP98170 497 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 NOMO1Q15155 1222 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 KLHDC10Q6PID8 442 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 PLET1Q6UQ28 207 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 ZNF395Q9H8N7 513 aaPredicted RBP12.02□□□□□ -0.48
SMG6-201ENST00000263073 POLE3Q9NRF9 147 aa12.02□□□□□ -0.48
SMG6-201ENST00000263073 PGRMC2O15173 223 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 HIST1H2ABP04908 130 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 NMBRP28336 390 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 RPTNQ6XPR3 784 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 STARD8Q92502 1023 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 HSPBAP1Q96EW2 488 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 EBF2Q9HAK2 575 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 TESMINQ9Y4I5 508 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 ARHGEF33A8MVX0 844 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 PDLIM1O00151 329 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 IPO13O94829 963 aaKnown RBP12.02□□□□□ -0.49
SMG6-201ENST00000263073 SNX4O95219 450 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 RPS6KA3P51812 740 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 MFSD5Q6N075 450 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 ING5Q8WYH8 240 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 AP3S1Q92572 193 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 PCDHB9Q9Y5E1 797 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 GRIN2DO15399 1336 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 H3BMM5 538 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 FPGTO14772 594 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 UGT2B11O75310 529 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 CABYRO75952 493 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 CATP04040 527 aaKnown RBP12.02□□□□□ -0.49
SMG6-201ENST00000263073 PDHA2P29803 388 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 FRMD7Q6ZUT3 714 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 VGLL2Q8N8G2 317 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 ANKRD52Q8NB46 1076 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 ZNF358Q9NW07 568 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 SYNPO2Q9UMS6 1093 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 PPLO60437 1756 aa12.02□□□□□ -0.49
SMG6-201ENST00000263073 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 MAGEC1O60732 1142 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 CSH1P0DML2 217 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 CSH2P0DML3 217 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 BMP7P18075 431 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 POLR2EP19388 210 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 ATXN1P54253 815 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 MTPNP58546 118 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 MRPS5P82675 430 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 PPP1R8Q12972 351 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 ACVR2BQ13705 512 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TMEM198Q66K66 360 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms