RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FAM219BQ5XKK7 198 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 CHSY3Q70JA7 882 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 CUZD1Q86UP6 607 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 PIM3Q86V86 326 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 GABPB2Q8TAK5 448 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-201ENST00000261963 HMGCLL1Q8TB92 370 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 PHF21BQ96EK2 531 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 PLEKHA8Q96JA3 519 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 RPRD1AQ96P16 312 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-201ENST00000261963 EFCAB1Q9HAE3 211 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 TUBA8Q9NY65 449 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-201ENST00000261963 A0A087WXM4 84 aa22.54■■□□□ 1.2
MCF2L-201ENST00000261963 SLC12A8A0AV02 714 aa22.54■■□□□ 1.2
MCF2L-201ENST00000261963 FAM171A1Q5VUB5 890 aa22.54■■□□□ 1.2
MCF2L-201ENST00000261963 NPAS2Q99743 824 aa22.54■■□□□ 1.2
MCF2L-201ENST00000261963 GPR62Q9BZJ7 368 aa22.54■■□□□ 1.2
MCF2L-201ENST00000261963 MEAF6Q9HAF1 191 aa22.54■■□□□ 1.2
MCF2L-201ENST00000261963 VNN2O95498 520 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 HSPA1AP0DMV8 641 aaKnown RBP22.53■■□□□ 1.2
MCF2L-201ENST00000261963 HSPA1BP0DMV9 641 aaKnown RBP22.53■■□□□ 1.2
MCF2L-201ENST00000261963 ARPP19P56211 112 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 PRAMEP78395 509 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 RFTN1Q14699 578 aaPredicted RBP22.53■■□□□ 1.2
MCF2L-201ENST00000261963 PARP15Q460N3 678 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 GPR158Q5T848 1215 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 NADSYN1Q6IA69 706 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 ITPKCQ96DU7 683 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 TBATAQ96M53 351 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 SEMA3CQ99985 751 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 ANKRD60Q9BZ19 345 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 GSTO2Q9H4Y5 243 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 CSPG5O95196 566 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 STAMBPO95630 424 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 PTPRCAPQ14761 206 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 GK5Q6ZS86 529 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 LRTOMTQ8WZ04 291 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 FAM193BQ96PV7 902 aaPredicted RBP22.53■■□□□ 1.2
MCF2L-201ENST00000261963 ALG9Q9H6U8 611 aa22.53■■□□□ 1.2
MCF2L-201ENST00000261963 OLA1Q9NTK5 396 aaKnown RBP22.53■■□□□ 1.2
MCF2L-201ENST00000261963 TRIM38O00635 465 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 ZBTB11O95625 1053 aaPredicted RBP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 ACVR1Q04771 509 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 EML3Q32P44 896 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 RSPO2Q6UXX9 243 aaPredicted RBP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 ISCA2Q86U28 154 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 CENPSQ8N2Z9 138 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 FAR2Q96K12 515 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 TLR8Q9NR97 1041 aaKnown RBP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 THSD7BQ9C0I4 1608 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 SOBPA7XYQ1 873 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 UBFD1O14562 309 aaKnown RBP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 PRAMEF11O60813 436 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 ADAM23O75077 832 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 FUCA1P04066 466 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 FGFR3P22607 806 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 OR1E1P30953 314 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 PBX3P40426 434 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 TIAL1Q01085 375 aaKnown RBP eCLIP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 CTBSQ01459 385 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 PPP1R3AQ16821 1122 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 ZNF549Q6P9A3 640 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 FAM156AQ8NDB6 213 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 TMA16Q96EY4 203 aaKnown RBP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 GPATCH1Q9BRR8 931 aaKnown RBP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 EML4Q9HC35 981 aaKnown RBP22.52■■□□□ 1.2
MCF2L-201ENST00000261963 CDC14AQ9UNH5 594 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 CRYL1Q9Y2S2 319 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 ARL5AQ9Y689 179 aa22.52■■□□□ 1.2
MCF2L-201ENST00000261963 GIPC1O14908 333 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 C16orf87Q6PH81 154 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 SLC22A9Q8IVM8 553 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 PTERQ96BW5 349 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 ASB9Q96DX5 294 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 SLC29A1Q99808 456 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 NEURL2Q9BR09 285 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 CCSER2Q9H7U1 834 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 MTMR11A4FU01 709 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 OR6C75A6NL08 312 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 K7EPI3 171 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 PLOD2O00469 737 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 HTRA2O43464 458 aaPredicted RBP22.51■■□□□ 1.19
MCF2L-201ENST00000261963 CLASP2O75122 1294 aaKnown RBP22.51■■□□□ 1.19
MCF2L-201ENST00000261963 ATE1O95260 518 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 SLC26A3P40879 764 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 RXRGP48443 463 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 GALNT1Q10472 559 aaPredicted RBP22.51■■□□□ 1.19
MCF2L-201ENST00000261963 PTK2BQ14289 1009 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 CYHR1Q6ZMK1 362 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 FAM47BQ8NA70 645 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 TBC1D15Q8TC07 691 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 POLR1EQ9GZS1 481 aaKnown RBP22.51■■□□□ 1.19
MCF2L-201ENST00000261963 RNF186Q9NXI6 227 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 SNX13Q9Y5W8 968 aa22.51■■□□□ 1.19
MCF2L-201ENST00000261963 TRIM64CA6NLI5 447 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 BAIAP3O94812 1187 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 GOT2P00505 430 aaKnown RBP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 IMPDH1P20839 514 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 SEMA3AQ14563 771 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 RNF180Q86T96 592 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 BLOC1S5Q8TDH9 187 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms