RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 TDRPQ86YL5 185 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 CRELD1Q96HD1 420 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 OR52E6Q96RD3 313 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 ERVK-11Q9UQG0 969 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 FRMPD4Q14CM0 1322 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 F5H5T6 163 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC28A1O00337 649 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 PABPC4LP0CB38 370 aaKnown RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 MTA1Q13330 715 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 MYBPC3Q14896 1274 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 MIIPQ5JXC2 388 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 TRIM40Q6P9F5 258 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 APTXQ7Z2E3 356 aaKnown RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 DDX53Q86TM3 631 aaKnown RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 STK40Q8N2I9 435 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 ALG3Q92685 438 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 USP7Q93009 1102 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CNPPD1Q9BV87 410 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 BTRCQ9Y297 605 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 KCNE2Q9Y6J6 123 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 A0A087X0B3 334 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 L7N2F9 121 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 ITM2AO43736 263 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 DYRK3O43781 588 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CSDE1O75534 798 aaKnown RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLURP2P0DP57 97 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CDH1P12830 882 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 RBBP4Q09028 425 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 LSAMPQ13449 338 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 EFCAB12Q6NXP0 572 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SPATA19Q7Z5L4 167 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 DSG4Q86SJ6 1040 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CEP76Q8TAP6 659 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 ROPN1LQ96C74 230 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 TUBA1CQ9BQE3 449 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 FNDC11Q9BVV2 318 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 TMEM168Q9H0V1 697 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CRYL1Q9Y2S2 319 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SHPRHQ149N8 1683 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 A0A1W2PPW3 197 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 PRH1P02810 166 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 LIPEQ05469 1076 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 BIKQ13323 160 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 OR52K1Q8NGK4 314 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 PTCD2Q8WV60 388 aaKnown RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 MAFIPQ8WZ33 124 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 QRFPRQ96P65 431 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 PANX3Q96QZ0 392 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 TAS2R14Q9NYV8 317 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CLEC4AQ9UMR7 237 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 KCNU1A8MYU2 1149 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 EPHB6O15197 1021 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 ACOX3O15254 700 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 BANF1O75531 89 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 MPSTP25325 297 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 VARSP26640 1264 aaKnown RBP13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 TM4SF1P30408 202 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 PBX1P40424 430 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 IRF8Q02556 426 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 CUZD1Q86UP6 607 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 DAW1Q8N136 415 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 GAL3ST3Q96A11 431 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZFP14Q9HCL3 533 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SNTG1Q9NSN8 517 aa13.12□□□□□ -0.31
PCDHGA3-201ENST00000253812 SERPINB7O75635 380 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 GSTT2BP0CG30 244 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 CBX5P45973 191 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 MPP1Q00013 466 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 DNASE1L3Q13609 305 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 SEMA3AQ14563 771 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 STARD3Q14849 445 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 PTPN20Q4JDL3 420 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 WDR45BQ5MNZ6 344 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ADGRD1Q6QNK2 874 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 OR7A10O76100 309 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 CSH1P0DML2 217 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 CSH2P0DML3 217 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 NFKB1P19838 968 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 MADCAM1Q13477 382 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 CBFBQ13951 182 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 FAM76BQ5HYJ3 339 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 UBR7Q8N806 425 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 CELF6Q96J87 481 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ALG2Q9H553 416 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 HBP1O60381 514 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 TSPAN3O60637 253 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 OTCP00480 354 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms