RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 XRCC1P18887 633 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-201ENST00000252108 MPSTP25325 297 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 SOX6P35712 828 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 GRIA3P42263 894 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 PIK3CGP48736 1102 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 RENBPP51606 427 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 TSPY1Q01534 308 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 RNF219Q5W0B1 726 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-201ENST00000252108 SPRYD7Q5W111 196 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF773Q6PK81 442 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 ACOT1Q86TX2 421 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 OR56A4Q8NGH8 313 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 SH3RF2Q8TEC5 729 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 STARD8Q92502 1023 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 ATXN7L3BQ96GX2 97 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 UBXN10Q96LJ8 280 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 FTHL17Q9BXU8 183 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 OXCT2Q9BYC2 517 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-201ENST00000252108 ABHD16BQ9H3Z7 469 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 WDCPQ9H6R7 721 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 POPDC3Q9HBV1 291 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 CCM2LQ9NUG4 571 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-201ENST00000252108 IFT80Q9P2H3 777 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-201ENST00000252108 RIMS3Q9UJD0 308 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 PSME2Q9UL46 239 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 IPPQ9Y573 584 aa4.14□□□□□ -1.75
UBE4A-201ENST00000252108 MYADML2A6NDP7 307 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 MROH6A6NGR9 719 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 TPD52L2O43399 206 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 SEC24DO94855 1032 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CPB1P15086 417 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CCNCP24863 283 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 EPHA3P29320 983 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 GMPRP36959 345 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 GJA8P48165 433 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 ERFP50548 548 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 FAM189BP81408 668 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 TRAF2Q12933 501 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 USP4Q13107 963 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 NME3Q13232 169 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 NRF1Q16656 503 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 UGT3A2Q3SY77 523 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 DCLRE1AQ6PJP8 1040 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 LRRC8DQ7L1W4 858 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 SCD5Q86SK9 330 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 NKAPQ8N5F7 415 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 TRPV3Q8NET8 790 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 OR52K1Q8NGK4 314 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 GAB3Q8WWW8 586 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 PEX13Q92968 403 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 HHIPQ96QV1 700 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 PKP2Q99959 881 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 RBM4BQ9BQ04 359 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 GPATCH1Q9BRR8 931 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 RBM4Q9BWF3 364 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 SP110Q9HB58 689 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 TRAF6Q9Y4K3 522 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 SYNJ2BP-COX16A0A087WUM0 186 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 DLGAP1O14490 977 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 HTRA2O43464 458 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 UGT2B11O75310 529 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 TFAP2AP05549 437 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 SLC35E2BP0CK96 405 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 HSD17B1P14061 328 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 KRT20P35900 424 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 NDUFV1P49821 464 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CRYBB1P53674 252 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 ELOAQ14241 798 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CACHD1Q5VU97 1274 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 MSANTD2Q6P1R3 559 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 RANBP10Q6VN20 620 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CUZD1Q86UP6 607 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 PIGZQ86VD9 579 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 HIPK1Q86Z02 1210 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 DEFB106AQ8N104 65 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 MYO1HQ8N1T3 1032 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 AMER2Q8N7J2 671 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 B3GALNT2Q8NCR0 500 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 GPRC5AQ8NFJ5 357 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 KBTBD8Q8NFY9 601 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 OR7A2PQ8NGA2 310 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 STAG3L4Q8TBR4 150 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 USP33Q8TEY7 942 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 C17orf50Q8WW18 174 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 PLEKHA8Q96JA3 519 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 RANBP9Q96S59 729 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CFHR5Q9BXR6 569 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 KLHL25Q9H0H3 589 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 COX16Q9P0S2 106 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 FBXO5Q9UKT4 447 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CNOT6Q9ULM6 557 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 MTCL1Q9Y4B5 1905 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 C1orf232A0A0U1RR37 186 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 PDHXO00330 501 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 INPP4BO15327 924 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 ZSCAN9O15535 394 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 MAFKO60675 156 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 CELF2O95319 508 aaKnown RBP4.13□□□□□ -1.75
UBE4A-201ENST00000252108 ANXA6P08133 673 aa4.13□□□□□ -1.75
UBE4A-201ENST00000252108 PRR35P0CG20 571 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms