RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 STC2O76061 302 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 F11P03951 625 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 C8BP07358 591 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 RHOCP08134 193 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 EEF1DP29692 281 aaKnown RBP19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 CORO1AP31146 461 aaKnown RBP19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 CHN2P52757 468 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 TSNQ15631 228 aaKnown RBP19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 PIANPQ8IYJ0 282 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 ST13P4Q8IZP2 240 aaPredicted RBP19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 MARVELD2Q8N4S9 558 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 STAG3L4Q8TBR4 150 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 BIRC8Q96P09 236 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 CYP2S1Q96SQ9 504 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 GPR21Q99679 349 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 SYTL2Q9HCH5 934 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 UBAP1Q9NZ09 502 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 CROTQ9UKG9 612 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 AGO1Q9UL18 857 aaKnown RBP19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 RNF112Q9ULX5 631 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 PCDHGB4Q9UN71 923 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 PCDHGB5Q9Y5G0 923 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 C15orf38-AP3S2A0A0A6YYH1 394 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 A0A0J9YYE9 177 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 A0A0U1RQS6 177 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 LCHNA4D1U4 455 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 CDC7O00311 574 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 TSPAN3O60637 253 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 OR1D2P34982 312 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 STX1BP61266 288 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 CLCQ05315 142 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 KIF19Q2TAC6 998 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 C6orf10Q5SRN2 563 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 HECTD3Q5T447 861 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 SLC8B1Q6J4K2 584 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 PSAPL1Q6NUJ1 521 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 C16orf59Q7L2K0 433 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 ARPINQ7Z6K5 226 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 DDIASQ8IXT1 998 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 RAET1EQ8TD07 263 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 LRCH3Q96II8 777 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 TMEM175Q9BSA9 504 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 GMPR2Q9P2T1 348 aaKnown RBP19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 ILVBLA1L0T0 632 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 NDUFS3O75489 264 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 ECI2O75521 394 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 FESP07332 822 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 HMGA1P17096 107 aaKnown RBP19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 PSMA3P25788 255 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 PTPRNQ16849 979 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 PITRM1Q5JRX3 1037 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 HACD2Q6Y1H2 254 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 FBXO39Q8N4B4 442 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 TOP1MTQ969P6 601 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 FUBP1Q96AE4 644 aaKnown RBP19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 RNF38Q9H0F5 515 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 CCDC68Q9H2F9 335 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 RETREG1Q9H6L5 497 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 SEMA4BQ9NPR2 832 aaPredicted RBP19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 MRPL40Q9NQ50 206 aaKnown RBP19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 PHF24Q9UPV7 400 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 BTRCQ9Y297 605 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 ARIH1Q9Y4X5 557 aaPredicted RBP19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 RAI2Q9Y5P3 530 aa19.44■□□□□ 0.7
CDC42EP1-201ENST00000249014 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 C2orf81A6NN90 581 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 OR1I1O60431 355 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 SEC24AO95486 1093 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 CD160O95971 181 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 INHAP05111 366 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 LINC00032P0C843 101 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 SLC7A2P52569 658 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 ARF5P84085 180 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 ECT2LQ008S8 904 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 RHDQ02161 417 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 RAD51Q06609 339 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 ZNF177Q13360 481 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 CATSPER1Q8NEC5 780 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 SLCO4A1Q96BD0 722 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 MAP10Q9P2G4 905 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 MTRRQ9UBK8 725 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 POLG2Q9UHN1 485 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 FKBPLQ9UIM3 349 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 RAB26Q9ULW5 256 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 AP4B1Q9Y6B7 739 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 OAS3Q9Y6K5 1087 aaKnown RBP19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 NPEPPSL1A6NEC2 478 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 C9JVG2 144 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 NR5A2O00482 541 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 AP1G1O43747 822 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 IRF1P10914 325 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 CDKL1Q00532 357 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 TRAP1Q12931 704 aaKnown RBP19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 LCP2Q13094 533 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 LIN52Q52LA3 116 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 RNF219Q5W0B1 726 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 CXorf57Q6NSI4 855 aaKnown RBP19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 KLHDC10Q6PID8 442 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 LINGO4Q6UY18 593 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms