RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SLC6A11P48066 632 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 KCNC1P48547 511 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 ALDH18A1P54886 795 aaKnown RBP23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 ACAP2Q15057 778 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 PSAPL1Q6NUJ1 521 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 SFTPA1Q8IWL2 248 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 AGR3Q8TD06 166 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 KXD1Q9BQD3 176 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 FAM83CQ9BQN1 747 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 RPP25Q9BUL9 199 aaKnown RBP23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 CCDC106Q9BWC9 280 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 TRPV4Q9HBA0 871 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 HS3ST2Q9Y278 367 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 ATP5BP06576 529 aaKnown RBP23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 CISD3P0C7P0 127 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 ATP5F1P24539 256 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 PTPN4P29074 926 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 SLC26A3P40879 764 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 SETMARQ53H47 684 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 ARMC12Q5T9G4 340 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 KIAA0907Q7Z7F0 614 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 ISCA2Q86U28 154 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 FGF14Q92915 247 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 MIPEPQ99797 713 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 TBC1D10AQ9BXI6 508 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 COG4Q9H9E3 785 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 FBXO10Q9UK96 956 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 RAP2CQ9Y3L5 183 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 ZNF711Q9Y462 761 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 STX7O15400 261 aaKnown RBP23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 HTRA2O43464 458 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 CCDC22O60826 627 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 MC4RP32245 332 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 CSNK1DP48730 415 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 ATAT1Q5SQI0 421 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 C22orf39Q6P5X5 142 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 PARM1Q6UWI2 310 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 FAM136AQ96C01 138 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 FAM161BQ96MY7 647 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 ILKAPQ9H0C8 392 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 FAM96AQ9H5X1 160 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 HACD3Q9P035 362 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 IL17CQ9P0M4 197 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 STK38LQ9Y2H1 464 aa23.26■■□□□ 1.31
SYNGR3-201ENST00000248121 ANTXRLA6NF34 631 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 H7C0S8 307 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 HOXC11O43248 304 aaPredicted RBP23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 TULP3O75386 442 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 HOXB8P17481 243 aaPredicted RBP23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 TFEBP19484 476 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 EPHB1P54762 984 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 DNAJB13P59910 316 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 ILF2Q12905 390 aaKnown RBP23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 UBAP2LQ14157 1087 aaKnown RBP23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 EPGNQ6UW88 154 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 LYSMD3Q7Z3D4 306 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 ETFBKMTQ8IXQ9 262 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 PTERQ96BW5 349 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 MAGEE1Q9HCI5 957 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 ZFP14Q9HCL3 533 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 ZDHHC2Q9UIJ5 367 aa23.25■■□□□ 1.31
SYNGR3-201ENST00000248121 A8MT66 165 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 A8MUI8 341 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 ZBTB14O43829 449 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 RBP1P09455 135 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 ZNF37AP17032 561 aaPredicted RBP23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 RASSF2P50749 326 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 XIAPP98170 497 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 ECT2LQ008S8 904 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 KLC3Q6P597 504 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 TRIM67Q6ZTA4 783 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 PARP9Q8IXQ6 854 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 BIRC8Q96P09 236 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 TCF12Q99081 682 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 TUBB6Q9BUF5 446 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 SHCBP1LQ9BZQ2 653 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 MTG2Q9H4K7 406 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 ALG9Q9H6U8 611 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 GTSE1Q9NYZ3 720 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 APOBEC2Q9Y235 224 aaKnown RBP23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 MUC22E2RYF6 1773 aaPredicted RBP23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 UBA6A0AVT1 1052 aaPredicted RBP23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 PRR5-ARHGAP8B1AHC4 643 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 MATN2O00339 956 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 GPR39O43194 453 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 HNRNPCL1O60812 293 aaKnown RBP23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 ADH1CP00326 375 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 CD1DP15813 335 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 CALB2P22676 271 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 FMO4P31512 558 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 DGKGP49619 791 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 ARHGAP8P85298 464 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 SLC9B1Q4ZJI4 515 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 CES5AQ6NT32 575 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 ZSWIM9Q86XI8 627 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 CCNYL1Q8N7R7 359 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 NXPE3Q969Y0 559 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 MRGPRX3Q96LB0 322 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 POPDC3Q9HBV1 291 aa23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 CYP4F12Q9HCS2 524 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms