RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 CD1DP15813 335 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 ZNF37AP17032 561 aaPredicted RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 CAPN3P20807 821 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 CDKN1CP49918 316 aaPredicted RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 LSAMPQ13449 338 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 NR6A1Q15406 480 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 KIAA1841Q6NSI8 718 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 TMEM102Q8N9M5 508 aaPredicted RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 SIDT2Q8NBJ9 832 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 SNRNP27Q8WVK2 155 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 CDKN2AIPNLQ96HQ2 116 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 PPM1MQ96MI6 270 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 MRM3Q9HC36 420 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 GALPQ9UBC7 116 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 UBA2Q9UBT2 640 aaPredicted RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 IQCF5A8MTL0 148 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 NME4O00746 187 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 SOCS2O14508 198 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 MUSKO15146 869 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 NOL3O60936 208 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 S100BP04271 92 aaPredicted RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 HLA-DPA1P20036 260 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 PRDX3P30048 256 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 SEMA3AQ14563 771 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 NEDD8Q15843 81 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 UMODL1-AS1Q8N2C9 162 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 PGBD5Q8N414 524 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 METTL6Q8TCB7 284 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 GPR63Q9BZJ6 419 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 FAM8A1Q9UBU6 413 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 EIF2B4Q9UI10 523 aaKnown RBP12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 OAZ3Q9UMX2 235 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 DMTF1Q9Y222 760 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 A0A0G2JMZ2 1700 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 PLOD2O00469 737 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 GPR39O43194 453 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 LDB2O43679 373 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 B4GALT3O60512 393 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 KPNA6O60684 536 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 RHOCP08134 193 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 HMOX2P30519 316 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 APLP1P51693 650 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 PRKCQQ04759 706 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 GPR141Q7Z602 305 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 CLEC4FQ8N1N0 589 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 TRPV1Q8NER1 839 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 HMGCLL1Q8TB92 370 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 NCLNQ969V3 563 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 LINGO1Q96FE5 620 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 ADNPQ9H2P0 1102 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 HACD3Q9P035 362 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 FFAR3O14843 346 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 GPR42O15529 346 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 OR1I1O60431 355 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 ECI2O75521 394 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 OR4F21O95013 312 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 TACR2P21452 398 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 GRM2Q14416 872 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 ZNF549Q6P9A3 640 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 IL27RAQ6UWB1 636 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 GPSM1Q86YR5 675 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 CPNE9Q8IYJ1 553 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 PELI3Q8N2H9 469 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 MAELQ96JY0 434 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 UBXN10Q96LJ8 280 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 MCMBPQ9BTE3 642 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 ZNF385DQ9H6B1 395 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 PNPLA3Q9NST1 481 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 POLG2Q9UHN1 485 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 FKBPLQ9UIM3 349 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 HEMK1Q9Y5R4 338 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 SLC30A1Q9Y6M5 507 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 TNFRSF10BO14763 440 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 HTRA2O43464 458 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 H6PDO95479 791 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 GNAO1P09471 354 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 CTPS1P17812 591 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 RPL17P18621 184 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 MC4RP32245 332 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 HTR7P34969 479 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 IL10RBQ08334 325 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 LCP2Q13094 533 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 PTRHD1Q6GMV3 140 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 LARP4Q71RC2 724 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 FUNDC1Q8IVP5 155 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 LRRC43Q8N309 656 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 BRSK1Q8TDC3 778 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 TM6SF2Q9BZW4 377 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 TMEM248Q9NWD8 314 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 SEPT3Q9UH03 358 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 GABRQQ9UN88 632 aa12.55□□□□□ -0.4
RAB3IP-201ENST00000247833 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms