RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 AHCYL2Q96HN2 611 aaKnown RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 SLC45A3Q96JT2 553 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 DDA1Q9BW61 102 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 TSGA10Q9BZW7 698 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 RETREG1Q9H6L5 497 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 CATSPERBQ9H7T0 1116 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 PDFQ9HBH1 243 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 PARVAQ9NVD7 372 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 GPATCH2LQ9NWQ4 482 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 KLHL3Q9UH77 587 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 PILRAQ9UKJ1 303 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 ADGRG1Q9Y653 693 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 TNRC6AQ8NDV7 1962 aaKnown RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 SPTBN1Q01082 2364 aaKnown RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 PALMO75781 387 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 KRT3P12035 628 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 MYCLP1P12525 358 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 DESP17661 470 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 TRIM23P36406 574 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 PTPN9P43378 593 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 MAPK9P45984 424 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 UQCRFS1P47985 274 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 PAPOLAP51003 745 aaKnown RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 TRA2AQ13595 282 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■□□□□ 10.9
DDX39A-201ENST00000242776 PTPRRQ15256 657 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 MARK2Q7KZI7 788 aaKnown RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 DPPA4Q7L190 304 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 TIPARPQ7Z3E1 657 aaKnown RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 C17orf82Q86X59 251 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 CENPIQ92674 756 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 MIB2Q96AX9 1013 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 CINPQ9BW66 212 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 PACSIN1Q9BY11 444 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 ASPSCR1Q9BZE9 553 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 SLC39A8Q9C0K1 460 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 APMAPQ9HDC9 416 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 PHPT1Q9NRX4 125 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 UVRAGQ9P2Y5 699 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 MYO1AQ9UBC5 1043 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 B4GALT6Q9UBX8 382 aa13.75□□□□□ -0.21
DDX39A-201ENST00000242776 USP9XQ93008 2570 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
DDX39A-201ENST00000242776 A0A0U1RQS6 177 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 PDE2AO00408 941 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-201ENST00000242776 ATMINO43313 823 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-201ENST00000242776 KRT86O43790 486 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 PRAMEF11O60813 436 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 CYP1A2P05177 515 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 TCN2P20062 427 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 ADCY8P40145 1251 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 ACTR1BP42025 376 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 SCNN1BP51168 640 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 ACTR1AP61163 376 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 KIF5AQ12840 1032 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 NR1D2Q14995 579 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 RAET1GQ6H3X3 334 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 PLEKHA7Q6IQ23 1121 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 ARHGAP36Q6ZRI8 547 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 ATCAYQ86WG3 371 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 STARD8Q92502 1023 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 NTAN1Q96AB6 310 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 RTP4Q96DX8 246 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
DDX39A-201ENST00000242776 NSMCE3Q96MG7 304 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 TUBGCP5Q96RT8 1024 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 FZD10Q9ULW2 581 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 PPP2R2CQ9Y2T4 447 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 TMEM98Q9Y2Y6 226 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 REXO2Q9Y3B8 237 aaKnown RBP13.74□□□□□ -0.21
DDX39A-201ENST00000242776 CACNA1DQ01668 2161 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 NOTCH2Q04721 2471 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 A0A0A6YYK5 440 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-201ENST00000242776 DFFAO00273 331 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 PJA2O43164 708 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 HOXC4P09017 264 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-201ENST00000242776 ETV3P41162 512 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 GPR3P46089 330 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 TPI1P60174 286 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 KLRB1Q12918 225 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 SEPT6Q14141 434 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 CNGA3Q16281 694 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 AFMIDQ63HM1 303 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 TMEM71Q6P5X7 295 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 DCUN1D2Q6PH85 259 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 TRIM74Q86UV6 250 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 UMODL1-AS1Q8N2C9 162 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 TEX19Q8NA77 164 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 COQ10AQ96MF6 247 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 SLC38A3Q99624 504 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 NUP85Q9BW27 656 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 FRMD8Q9BZ67 464 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-201ENST00000242776 LRRC19Q9H756 370 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 SP110Q9HB58 689 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 PLEKHB1Q9UF11 243 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms