RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 PSAT1Q9Y617 370 aa17.09■□□□□ 0.33
SLC1A4-201ENST00000234256 TACR2P21452 398 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 ARHGAP1Q07960 439 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 SGCGQ13326 291 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 SLC24A5Q71RS6 500 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 C2orf73Q8N5S3 287 aaPredicted RBP17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 VPS35Q96QK1 796 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 SLC39A3Q9BRY0 314 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 HERPUD2Q9BSE4 406 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 MRPS26Q9BYN8 205 aaKnown RBP17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 CNTN6Q9UQ52 1028 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 CITO14578 2027 aa17.08■□□□□ 0.33
SLC1A4-201ENST00000234256 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 FAM25AB3EWG3 89 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 FAM25CB3EWG5 89 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 FAM25GB3EWG6 89 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 PIP5K1BO14986 540 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 GOT2P00505 430 aaKnown RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 IL1BP01584 269 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 CYP2A6P11509 494 aaPredicted RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 ACTR3P61158 418 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 LIPEQ05469 1076 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 TAS1R3Q7RTX0 852 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 EPHX4Q8IUS5 362 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 ACBD6Q9BR61 282 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 IGSF9Q9P2J2 1179 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 ERAL1O75616 437 aaKnown RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 PABPC1P11940 636 aaKnown RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 HIPK1Q86Z02 1210 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 OR2T34Q8NGX1 318 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 OR2T3Q8NH03 318 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 HOPXQ9BPY8 73 aaPredicted RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 CCDC28BQ9BUN5 200 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 SPACA6W5XKT8 324 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 KPNA4O00629 521 aaPredicted RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 CLDN11O75508 207 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 HPGDP15428 266 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 GNA12Q03113 381 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 ILF2Q12905 390 aaKnown RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 KCNA10Q16322 511 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 RGMBQ6NW40 437 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 NAPRTQ6XQN6 538 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 CNTD1Q8N815 330 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 PAWRQ96IZ0 340 aaKnown RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 EIF2B4Q9UI10 523 aaKnown RBP17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 KCNE2Q9Y6J6 123 aa17.08■□□□□ 0.32
SLC1A4-201ENST00000234256 H0Y858 1186 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 NBNO60934 754 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 YBEYP58557 167 aaPredicted RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 TMEM214Q6NUQ4 689 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 TXNDC11Q6PKC3 985 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 RPS27LQ71UM5 84 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 HJURPQ8NCD3 748 aaPredicted RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 OR13C4Q8NGS5 318 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 CENPIQ92674 756 aaPredicted RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 FIZ1Q96SL8 496 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 SLC9A7Q96T83 725 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 UNC93B1Q9H1C4 597 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 RAD21L1Q9H4I0 556 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 FKBPLQ9UIM3 349 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 ZNF490Q9ULM2 529 aaPredicted RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 MYH11P35749 1972 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 XRCC1P18887 633 aaPredicted RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 THOP1P52888 689 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 RPS24P62847 133 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 CYP2A13Q16696 494 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 LDLRAP1Q5SW96 308 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 UBAP2Q5T6F2 1119 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 RAET1GQ6H3X3 334 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 OLFML1Q6UWY5 402 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 KIAA0408Q6ZU52 694 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 UBE2R2Q712K3 238 aaPredicted RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 TNKS2Q9H2K2 1166 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 OR6C75A6NL08 312 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 NRP1O14786 923 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 STBD1O95210 358 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 SEC24AO95486 1093 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 CAPN1P07384 714 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 CLTBP09497 229 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 GGT5P36269 586 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 GNPDA1P46926 289 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 POLR2JP52435 117 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 TBC1D21Q8IYX1 336 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 RTL3Q8N8U3 475 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 SLC35F5Q8WV83 523 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 SUSD6Q92537 303 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 RPL10LQ96L21 214 aaKnown RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 LYVE1Q9Y5Y7 322 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 MYH6P13533 1939 aa17.07■□□□□ 0.32
SLC1A4-201ENST00000234256 KCNJ11Q14654 390 aa17.06■□□□□ 0.32
SLC1A4-201ENST00000234256 NR1D2Q14995 579 aa17.06■□□□□ 0.32
SLC1A4-201ENST00000234256 CCL14Q16627 93 aa17.06■□□□□ 0.32
SLC1A4-201ENST00000234256 CEP78Q5JTW2 689 aa17.06■□□□□ 0.32
SLC1A4-201ENST00000234256 EFCAB10A6NFE3 127 aa17.06■□□□□ 0.32
SLC1A4-201ENST00000234256 PRKCGP05129 697 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms