RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CCDC107Q8WV48 283 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 LRTOMTQ8WZ04 291 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 ERVK-5Q9HDB9 667 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 NKRFO15226 690 aaKnown RBP eCLIP8.2□□□□□ -1.1
APOB-201ENST00000233242 PTGIRP43119 386 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 SEZ6Q53EL9 994 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 DEF8Q6ZN54 512 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 BTN2A1Q7KYR7 527 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 OR5K1Q8NHB7 308 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 C18orf25Q96B23 403 aaPredicted RBP8.2□□□□□ -1.1
APOB-201ENST00000233242 GTPBP2Q9BX10 602 aaKnown RBP8.2□□□□□ -1.1
APOB-201ENST00000233242 NUP50Q9UKX7 468 aa8.2□□□□□ -1.1
APOB-201ENST00000233242 DISP2A7MBM2 1401 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CSH1P0DML2 217 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CSH2P0DML3 217 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 SLC27A1Q6PCB7 646 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 IL1RAPQ9NPH3 570 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 GRHL1Q9NZI5 618 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 FAM25EA8MYX2 175 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 IFNW1P05000 195 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 IFNA6P05013 189 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 JAM2P57087 298 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TAS2R40P59535 323 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CBLBQ13191 982 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 BIKQ13323 160 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 KCNA10Q16322 511 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CTXN3Q4LDR2 81 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 USP45Q70EL2 814 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CHST15Q7LFX5 561 aaPredicted RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 COMMD2Q86X83 199 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 COLGALT2Q8IYK4 626 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 SPOCK2Q92563 424 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CREB3L1Q96BA8 519 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ABCC13Q9NSE7 274 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ATPIF1Q9UII2 106 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PRAMEF33A0A0G2JMD5 474 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PRAMEF10O60809 474 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CAP2P40123 477 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PTPN5P54829 565 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PGM5Q15124 567 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TEAD4Q15561 434 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 SMU1Q2TAY7 513 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ZACNQ401N2 412 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 KCNK18Q7Z418 384 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CCDC115Q96NT0 180 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 RNF38Q9H0F5 515 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 SLC6A15Q9H2J7 730 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ANKDD1BA6NHY2 528 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 RFWD3Q6PCD5 774 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PAMR1Q6UXH9 720 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PDCD2LQ9BRP1 358 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 WDR55Q9H6Y2 383 aaPredicted RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 COQ10BQ9H8M1 238 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ZCCHC11Q5TAX3 1644 aaKnown RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 OR6A2O95222 327 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 NR2F1P10589 423 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ALDH7A1P49419 539 aaKnown RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 TAF13Q15543 124 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 GCNT6Q5T4J0 391 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 C6orf89Q6UWU4 347 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PDSS2Q86YH6 399 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 KBTBD7Q8WVZ9 684 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 DNAJC1Q96KC8 554 aaKnown RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 ZNF347Q96SE7 839 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TBX1O43435 398 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 GLDCP23378 1020 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 MAGEA2P43356 314 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 SLC9A3P48764 834 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 INTS6LQ5JSJ4 861 aaKnown RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 FAM183BPQ6ZVS7 135 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ITIH5Q86UX2 942 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 RFT1Q96AA3 541 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 KCTD15Q96SI1 283 aaPredicted RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 OR2B2Q9GZK3 357 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 MROH8Q9H579 483 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TDRKHQ9Y2W6 561 aaKnown RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 H0YJX3 145 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CRADDP78560 199 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 NUMA1Q14980 2115 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TMEM161BQ8NDZ6 487 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TKTL2Q9H0I9 626 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 LMAN2LQ9H0V9 348 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 AAASQ9NRG9 546 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PCDHB5Q9Y5E4 795 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CARNS1A5YM72 827 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ITGA10O75578 1167 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 VPS26BQ4G0F5 336 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ARL13AQ5H913 290 aaPredicted RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 ZFP14Q9HCL3 533 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PCDHB7Q9Y5E2 793 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CDKN2BP42772 138 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 DPY19L1Q2PZI1 675 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TFAP2DQ7Z6R9 452 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 CPT1BQ92523 772 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 EFHD2Q96C19 240 aaPredicted RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 PRDM12Q9H4Q4 367 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 AZGP1P25311 298 aaKnown RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 NPNTQ6UXI9 565 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 SLC4A11Q8NBS3 891 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms