RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 KDELC1Q6UW63 502 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 C17orf99Q6UX52 265 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 GPRIN3Q6ZVF9 776 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 LPCAT2Q7L5N7 544 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 RASAL3Q86YV0 1011 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 FAM47BQ8NA70 645 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 VPS33AQ96AX1 596 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 NSMCE2Q96MF7 247 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 NSUN5Q96P11 429 aaKnown RBP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 CDK5RAP1Q96SZ6 601 aaKnown RBP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 OSBPL11Q9BXB4 747 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 MRPS26Q9BYN8 205 aaKnown RBP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 TCAF2A6NFQ2 919 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 RNASEH2AO75792 299 aaKnown RBP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 TUFMP49411 452 aaKnown RBP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 SERINC3Q13530 473 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 CAMK1DQ8IU85 385 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 UPF1Q92900 1129 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 PAPSS2O95340 614 aaPredicted RBP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 MLYCDO95822 493 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 NR1H2P55055 460 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 ANKS3Q6ZW76 656 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 CNTN4Q8IWV2 1026 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 TCF12Q99081 682 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 FNIP2Q9P278 1114 aa14.9□□□□□ -0.02
UBE2D4-201ENST00000222402 LDLRP01130 860 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 PRSS56P0CW18 603 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 ITGALP20701 1170 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 ARNTP27540 789 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 ATG14Q6ZNE5 492 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 LIMS2Q7Z4I7 341 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 DBF4BQ8NFT6 615 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 MAGEE2Q8TD90 523 aaPredicted RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 HOPXQ9BPY8 73 aaPredicted RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 TTPALQ9BTX7 342 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 GKN1Q9NS71 199 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 OSER1Q9NX31 292 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 ORC6Q9Y5N6 252 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 DOCK3Q8IZD9 2030 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 FFAR3O14843 346 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 INSIG1O15503 277 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 GPR42O15529 346 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 NIPSNAP2O75323 286 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 OR6B1O95007 311 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 CKMP06732 381 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 CORO1AP31146 461 aaKnown RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 ATN1P54259 1190 aaPredicted RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 ILF2Q12905 390 aaKnown RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 IRF5Q13568 498 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 ARHGEF7Q14155 803 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 B3GNT6Q6ZMB0 384 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 GPR141Q7Z602 305 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 MILR1Q7Z6M3 343 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 MFSD6LQ8IWD5 586 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 CPNE9Q8IYJ1 553 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 LRRC43Q8N309 656 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 SIDT2Q8NBJ9 832 aaKnown RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 CCDC90BQ9GZT6 254 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 MAGEH1Q9H213 219 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 POLG2Q9UHN1 485 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 GOLGA4Q13439 2230 aaKnown RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 BBIP1A8MTZ0 92 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 CDC7O00311 574 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 C1RP00736 705 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 XPAP23025 273 aaPredicted RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 BFSP2Q13515 415 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 OGFRL1Q5TC84 451 aaPredicted RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 BEND5Q7L4P6 421 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 CPSF7Q8N684 471 aaKnown RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 TMEM169Q96HH4 297 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 C9orf16Q9BUW7 83 aa14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 EIF2B4Q9UI10 523 aaKnown RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 LSM7Q9UK45 103 aaKnown RBP14.89□□□□□ -0.03
UBE2D4-201ENST00000222402 TTC3P53804 2025 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 CCDC189A1A4V9 331 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ZNF7P17097 686 aaPredicted RBP14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 OGNP20774 298 aaKnown RBP14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ADRA1AP35348 466 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ACLYP53396 1101 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 RHDQ02161 417 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 CHRNB3Q05901 458 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 UNC50Q53HI1 259 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ISCA2Q86U28 154 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 CBR4Q8N4T8 237 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 TRIM8Q9BZR9 551 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 SUCOQ9UBS9 1254 aaKnown RBP14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 LEF1Q9UJU2 399 aaPredicted RBP14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ANAPC2Q9UJX6 822 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ACTL7AQ9Y615 435 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 KANSL1LA0AUZ9 987 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 CLDN11O75508 207 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 GJB3O75712 270 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 SLC22A3O75751 556 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 FCGR1AP12314 374 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ZNF37AP17032 561 aaPredicted RBP14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 PRKG2Q13237 762 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 ARMC12Q5T9G4 340 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
UBE2D4-201ENST00000222402 OR13J1Q8NGT2 312 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms