RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RPS9P46781 194 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 HCAR3P49019 387 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CCT3P49368 545 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 PLK1P53350 603 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 INHBEP58166 350 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 YBEYP58557 167 aaPredicted RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 MRPS6P82932 125 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 NDUFA9Q16795 377 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 ZBED5Q49AG3 693 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 SYCE2Q6PIF2 218 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CNSTQ6PJW8 725 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 OAFQ86UD1 273 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 MON1AQ86VX9 555 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 ECHDC2Q86YB7 292 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 FBXO16Q8IX29 292 aaPredicted RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 UBR7Q8N806 425 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 RBM15BQ8NDT2 890 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 RCN3Q96D15 328 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 SDCBP2Q9H190 292 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 COL1A1P02452 1464 aaPredicted RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 KCPQ6ZWJ8 1503 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 ELOVL7A1L3X0 281 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 SLC30A4O14863 429 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 KERAO60938 352 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CLDN11O75508 207 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 KHDRBS3O75525 346 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 RECQL4O94761 1208 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 THRBP10828 461 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 ALDH4A1P30038 563 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CRATP43155 626 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 GNPDA1P46926 289 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CLK2P49760 499 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 CRYBB1P53674 252 aaPredicted RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 AMHR2Q16671 573 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 TCEAL5Q5H9L2 206 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 ALYREFQ86V81 257 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 P2RY8Q86VZ1 359 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 FITM2Q8N6M3 262 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 POC5Q8NA72 575 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 SRFBP1Q8NEF9 429 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 ALG3Q92685 438 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 PEX13Q92968 403 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 PLD4Q96BZ4 506 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 HAPLN3Q96S86 360 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 HIPK3Q9H422 1215 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 C3orf14Q9HBI5 128 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 FAM53CQ9NYF3 392 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 TAS2R14Q9NYV8 317 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 NRAPQ86VF7 1730 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 UNCXA6NJT0 531 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 PDCD5O14737 125 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 DHX15O43143 795 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 CILPO75339 1184 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 AGR2O95994 175 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 BMP7P18075 431 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 UBA1P22314 1058 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 ICAM3P32942 547 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ARFIP1P53367 373 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 USP46P62068 366 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 EIF5AP63241 154 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 STARD3Q14849 445 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 VPS26BQ4G0F5 336 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ZNF467Q7Z7K2 595 aaPredicted RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 ARL10Q8N8L6 244 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 BPIFB6Q8NFQ5 453 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ASZ1Q8WWH4 475 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 BIRC8Q96P09 236 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ERMAPQ96PL5 475 aaPredicted RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 KCTD15Q96SI1 283 aaPredicted RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 AGAP2Q99490 1192 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ROGDIQ9GZN7 287 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 C14orf105Q9NVL8 296 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ZIM2Q9NZV7 527 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 USP20Q9Y2K6 914 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ZNF451Q9Y4E5 1061 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 IL1BP01584 269 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ZNF286BP0CG31 522 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 HNF4AP41235 474 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SRSF11Q05519 484 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 KLF10Q13118 480 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SGCGQ13326 291 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ACOX1Q15067 660 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 C9orf57Q5W0N0 161 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 PLET1Q6UQ28 207 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 TIFABQ6ZNK6 161 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 COLGALT2Q8IYK4 626 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 GPC2Q8N158 579 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 VPS35Q96QK1 796 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 LRRC3Q9BY71 257 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SLC25A51Q9H1U9 297 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CNOT11Q9UKZ1 510 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 FAM234BA2RU67 622 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 RCCD1A6NED2 376 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 H3BNH8 94 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 TSPAN9O75954 239 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 LGALS2P05162 132 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 RPLP0P05388 317 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 CBSLP0DN79 551 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CBSP35520 551 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CENPAP49450 140 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms