RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TWNKQ96RR1 684 aa18.79■□□□□ 0.6
MBD3-201ENST00000156825 DTLQ9NZJ0 730 aa18.79■□□□□ 0.6
MBD3-201ENST00000156825 MKL2Q9ULH7 1088 aa18.79■□□□□ 0.6
MBD3-201ENST00000156825 SDK1Q7Z5N4 2213 aa18.79■□□□□ 0.6
MBD3-201ENST00000156825 SF1Q15637 639 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 ZNHIT3Q15649 155 aaPredicted RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 LPCAT4Q643R3 524 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 FSTL4Q6MZW2 842 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 CLP1Q92989 425 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 MRPL48Q96GC5 212 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 TXNRD2Q9NNW7 524 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 RAB23Q9ULC3 237 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 PSMD13Q9UNM6 376 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 MYO5BQ9ULV0 1848 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 METTL18O95568 372 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 EFNA1P20827 205 aaPredicted RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 L1CAMP32004 1257 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 VPS26BQ4G0F5 336 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 LYPLAL1Q5VWZ2 237 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 UTS2BQ765I0 119 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 CACTIN-AS1Q8N1I8 211 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 MRPS7Q9Y2R9 242 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 AK5Q9Y6K8 562 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 KIF1AQ12756 1690 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 CACNB4O00305 520 aaPredicted RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 FGBP02675 491 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 MAGEA10P43363 369 aaPredicted RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 CYP4F8P98187 520 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 TNK2Q07912 1038 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 TRAF3Q13114 568 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 METTL3Q86U44 580 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 ECHDC2Q86YB7 292 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 NTPCRQ9BSD7 190 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 MAT2BQ9NZL9 334 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 MED26O95402 600 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 SPIBQ01892 262 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 HIPK1Q86Z02 1210 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 AP2M1Q96CW1 435 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 NOL11Q9H8H0 719 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 GULP1Q9UBP9 304 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 RPS6KA6Q9UK32 745 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 IKZF3Q9UKT9 509 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 UGT1A9O60656 530 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 MANFP55145 182 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 RPS24P62847 133 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 NAPRTQ6XQN6 538 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 YTHDF3Q7Z739 585 aaKnown RBP18.78■□□□□ 0.6
MBD3-201ENST00000156825 OR14C36Q8NHC7 312 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 POLR1BQ9H9Y6 1135 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 UGT1A7Q9HAW7 530 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 UGT1A10Q9HAW8 530 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 UGT1A8Q9HAW9 530 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 FKBPLQ9UIM3 349 aa18.78■□□□□ 0.6
MBD3-201ENST00000156825 QSOX1O00391 747 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 PRKCGP05129 697 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 NPAS4Q8IUM7 802 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 ZNF540Q8NDQ6 660 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 RBM15BQ8NDT2 890 aaKnown RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 PPCDCQ96CD2 204 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 C19orf60Q96EN9 201 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 ZFRQ96KR1 1074 aaKnown RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 GKN1Q9NS71 199 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 SMIM31A0A1B0GVY4 71 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 UNGP13051 313 aaPredicted RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 CCNCP24863 283 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 CHN2P52757 468 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 CBX2Q14781 532 aaPredicted RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 ZNF544Q6NX49 715 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 CTU1Q7Z7A3 348 aaKnown RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 FBXO22Q8NEZ5 403 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 FEM1CQ96JP0 617 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 ADI1Q9BV57 179 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 SLC39A8Q9C0K1 460 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 IPPKQ9H8X2 491 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 MAT2AP31153 395 aaKnown RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 RPL4P36578 427 aaKnown RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 YBEYP58557 167 aaPredicted RBP18.77■□□□□ 0.6
MBD3-201ENST00000156825 IZUMO1Q8IYV9 350 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 TSPAN14Q8NG11 270 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 ZFP28Q8NHY6 868 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 NUAK2Q9H093 628 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 ENOPH1Q9UHY7 261 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 ANGPT4Q9Y264 503 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 PRKAB1Q9Y478 270 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 TCAF1Q9Y4C2 921 aa18.77■□□□□ 0.6
MBD3-201ENST00000156825 SHPRHQ149N8 1683 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 A0A1B0GVM2 712 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 TCAF2A6NFQ2 919 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 GOT2P00505 430 aaKnown RBP18.77■□□□□ 0.59
MBD3-201ENST00000156825 CES1P23141 567 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 GRIA1P42261 906 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 SPANXN2Q5MJ10 180 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 HDDC2Q7Z4H3 204 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 C17orf64Q86WR6 236 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 TERB1Q8NA31 727 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 ST13P5Q8NFI4 369 aaPredicted RBP18.77■□□□□ 0.59
MBD3-201ENST00000156825 TSPAN18Q96SJ8 248 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 VPS4AQ9UN37 437 aa18.77■□□□□ 0.59
MBD3-201ENST00000156825 MATN3O15232 486 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms