RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Cdh4P39038 913 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Khdc4Q3TCX3 612 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Angptl1Q640P2 490 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Iqcf4Q6P8Y2 204 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Dmtf1Q8CE22 761 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Bloc1s5Q8R015 185 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Tmem150aQ91WN2 271 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Spesp1Q9D5A0 399 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 MecrQ9DCS3 373 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Man1b1A2AJ15 658 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 IppP28575 584 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 TgfbiP82198 683 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Pdcd4Q61823 469 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 C6.1alQ7M757 291 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Naaladl1Q7M758 745 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Susd6Q8BGE4 302 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Ctxn3Q8BXZ0 80 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 RtknQ8C6B2 564 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Mfsd5Q921Y4 450 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 IqchQ9D2K4 1071 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 S100a14Q9D2Q8 104 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Ripk3Q9QZL0 486 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Ttll6A4Q9E8 822 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Cyp2a22B2RXZ2 492 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Herc6F2Z461 1003 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Polr1cP52432 346 aaKnown RBP13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Pacs2Q3V3Q7 862 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Slc22a16Q497L8 649 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Tapt1Q4VBD2 564 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Trit1Q80UN9 467 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Mettl21cQ8BLU2 248 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Galnt18Q8K1B9 622 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Pcdhga9Q91XX9 932 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Lsm12Q9D0R8 195 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Map3k14Q9WUL6 942 aa13.95□□□□□ -0.18
Col3a1-201ENSMUST00000087883 PargO88622 969 aaKnown RBP13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Ctps1P70698 591 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Zfp935Q14DI0 353 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Fcho2Q3UQN2 809 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Clca4bQ3UW98 925 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Mpzl3Q3V3F6 237 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Arnt2Q61324 712 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Pcdhb13Q91Y06 796 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Otud3B1AZ99 396 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Has3O08650 554 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Kng1O08677 661 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Pitpnm1O35954 1243 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Bnip2O54940 326 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Lrrn4P59383 733 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 OmpQ64288 163 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Svs6Q64356 99 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Msantd2Q6NZR2 559 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Dus1lQ8C2P3 475 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Wdr26Q8C6G8 641 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Arpc2Q9CVB6 300 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Borcs6Q9D6W8 360 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Mxra8Q9DBV4 442 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Zscan4eA0A1B0GRE8 505 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Lipo4D3Z608 396 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 4930544D05RikJ3QK56 214 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Phka1P18826 1241 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Snrpd1P62315 119 aaKnown RBP13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Bcl2a1Q07440 172 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 ScaiQ8C8N2 606 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Crispld1Q8CGD2 500 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Prl8a6Q9DAY2 240 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Dcpp3L7N259 170 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Spp1P10923 294 aaKnown RBP13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Irf1P15314 329 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 DctP29812 517 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Acvrl1Q61288 502 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Olfr1037Q7TR84 321 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 MaelQ8BVN9 434 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Txndc17Q9CQM5 123 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Gemin2Q9CQQ4 269 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Skp1Q9WTX5 163 aa13.94□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Gm13088A2AGW6 460 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Kifc5bE9PUA5 672 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Prdm15E9Q8T2 1174 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 H2-Q1O19441 368 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 NsmafO35242 920 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 DgkaO88673 730 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 SagP20443 403 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Cyp17a1P27786 507 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Meis2P97367 477 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Atp5jP97450 108 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Sema5bQ60519 1093 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Baiap2Q8BKX1 535 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Fnbp1lQ8K012 605 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Gm42417Q8K1D0 126 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Aspscr1Q8VBT9 550 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Slc25a36Q922G0 311 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Dcp2Q9CYC6 422 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Tmem114Q9D563 222 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 DguokQ9QX60 277 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 4931408C20RikE9PWP9 1381 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Sult6b2B7ZWN4 290 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Cntnap3E9PY62 1287 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Ppp2r2bQ6ZWR4 443 aa13.93□□□□□ -0.18
Col3a1-201ENSMUST00000087883 Slc39a4Q78IQ7 660 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms