RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Rin3P59729 980 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Snrpd1P62315 119 aaKnown RBP22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Adra1dP97714 562 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Armc7Q3UJZ3 198 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Cypt4Q6P925 153 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Slc6a17Q8BJI1 727 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Rspry1Q8BVR6 576 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Lrif1Q8CDD9 755 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ap4b1Q9WV76 738 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ror2Q9Z138 944 aa22.84■■□□□ 1.25
Upf3a-201ENSMUST00000043767 ComtO88587 265 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 P01668 110 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 RpsaP14206 295 aaKnown RBP22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Kpna2P52293 529 aaKnown RBP22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Glt6d1Q2NKH9 311 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Atp4aQ64436 1033 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Q6GQU0 248 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 C8bQ8BH35 589 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Sfr1Q8BP27 319 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 TbcdQ8BYA0 1196 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Frs2Q8C180 508 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ephb1Q8CBF3 984 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gramd1aQ8VEF1 722 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Camk1Q91YS8 374 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 HnrnpllQ921F4 591 aaKnown RBP22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Q9CPS8 106 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Vsig1Q9D2J4 407 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Paip2Q9D6V8 124 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Csnk1dQ9DC28 415 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gbp2Q9Z0E6 589 aa22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Nup205A0A0J9YUD5 2061 aaKnown RBP22.83■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Cd9P40240 226 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ptpn5P54830 541 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Caprin2Q05A80 1031 aaKnown RBP22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cntn4Q69Z26 1026 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Fam167aQ6P1G6 215 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm7247Q6UY52 187 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Olfr1505Q7TQQ2 316 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Lrrc27Q80YS5 523 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Sugp1Q8CH02 643 aaKnown RBP22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 TmieQ8K467 153 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Acsf2Q8VCW8 615 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mrpl14Q9D1I6 145 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 MrgbpQ9DAT2 204 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Fbxl12Q9EPX5 326 aa22.83■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Fbrsl1E9Q9T0 1031 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Tsga10ipF7A1F0 157 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm10715J3QP74 227 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Serpini1O35684 410 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cxcr3O88410 367 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cd8aP01731 247 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Uba1yP31254 1058 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Tial1P70318 392 aaKnown RBP22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Tmem207P86045 143 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 PtprcapQ64697 197 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Nlrp9cQ66X01 1004 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Snx31Q6P8Y7 439 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Prr18Q6PAN7 307 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Slc16a9Q7TM99 508 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Olfr765Q7TRI6 309 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Dnajc6Q80TZ3 938 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Olfr767Q8VG33 309 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mlc1Q8VHK5 382 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Pih1d1Q9CQJ2 290 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mxra7Q9CZH7 178 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cdc7Q9Z0H0 564 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Unc80Q8BLN6 3261 aa22.82■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Olfr310B2RVZ1 332 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Smad6O35182 495 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cd4P06332 457 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 CblP22682 913 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gja4P28235 333 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Washc5Q8C2E7 1159 aaKnown RBP22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cfap61Q8CEL2 1252 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Dhx36Q8VHK9 1001 aaKnown RBP22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Slc13a1Q9JHI4 594 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ect2lA0A140LIP2 953 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Tcte1A6H639 498 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm2956E9PVJ0 216 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zc3h7aE9PWW6 970 aaKnown RBP22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Glyatl3E9Q5L8 290 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Sgo2bJ3QMK1 1167 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cd151O35566 253 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gsta3P30115 221 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Acvr1P37172 509 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Polr3bP59470 1133 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Eif2ak2Q03963 515 aaKnown RBP22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 StradaQ3UUJ4 431 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Rftn1Q6A0D4 554 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Arhgap20Q6IFT4 1182 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cyp2d40Q6P8N9 338 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Defb14Q7TNV9 67 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 SheQ8BSD5 492 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Tmem72Q8C3K5 275 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mettl3Q8C3P7 580 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Pofut2Q8VHI3 429 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 TmlheQ91ZE0 421 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Krt7Q9DCV7 457 aa22.81■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Sppl2cA2A6C4 690 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Vmn1r76F8VQ63 324 aa22.8■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms